Gene Symbol | Tmem196 |
Entrez Gene ID | 217951 |
Full Name | transmembrane protein 196 |
Synonyms | Gm528 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Tmem196 cDNA ORF clone
Gene Symbol | Tmem196 |
Entrez Gene ID | 217951 |
Full Name | transmembrane protein 196 |
Synonyms | Gm528 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001294146.1 | NP_001281075.1 | transmembrane protein 196 isoform 1 |
XM_006515787.3 | XP_006515850.1 | transmembrane protein 196 isoform X1 |
NM_001160385.2 | NP_001153857.1 | transmembrane protein 196 isoform 2 |
NM_001294154.1 | NP_001281083.1 | transmembrane protein 196 isoform 3 |
Xenopus tropicalis (tropical clawed frog) | tmem196 | NP_001096449.1 |
Pan troglodytes (chimpanzee) | TMEM196 | XP_001151953.2 |
Rattus norvegicus (Norway rat) | Tmem196 | NP_001037734.1 |
Bos taurus (cattle) | TMEM196 | NP_001193700.1 |
Danio rerio (zebrafish) | LOC798466 | XP_001338909.3 |
Homo sapiens (human) | TMEM196 | NP_689987.3 |
Canis lupus familiaris (dog) | TMEM196 | XP_003431964.1 |
Gallus gallus (chicken) | TMEM196 | XP_004939398.1 |
TMEM196 | XP_001102739.2 | |
Mus musculus (house mouse) | Tmem196 | NP_001153857.1 |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K, Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A, Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S, Wohnoutka P, Hawrylycz MJ, Puelles L, Jones AR
Neuron83(2)309-323(2014 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Tmem196 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tmem196 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu23725 | |
Clone ID Related Accession (Same CDS sequence) | NM_001160385.2 | |
Accession Version | NM_001160385.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 531bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-10 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane protein 196 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC164110.4 and AC225445.3. On Jun 26, 2014 this sequence version replaced NM_001160385.1. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00849382, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGCACCA GCGGCCAGAT CATTGGGAGC CTTTTGGTGC TCTCTGTGCT GGAGATAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001153857.1 |
CDS | 513..1043 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001160385.2 |
1 | ATGTGCACCA GCGGCCAGAT CATTGGGAGC CTTTTGGTGC TCTCTGTGCT GGAGATAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu23729 | |
Clone ID Related Accession (Same CDS sequence) | NM_001294146.1 | |
Accession Version | NM_001294146.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 549bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-10 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane protein 196 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC164110.4 and AC225445.3. On Jun 26, 2014 this sequence version replaced XM_006515788.1. Transcript Variant: This variant (1) encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.260912.1, SRR1660817.140657.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849382, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGCACCA GCGGCCAGAT CATTGGGAGC CTTTTGGTGC TCTCTGTGCT GGAGATAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001281075.1 |
CDS | 513..1061 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001294146.1 |
1 | ATGTGCACCA GCGGCCAGAT CATTGGGAGC CTTTTGGTGC TCTCTGTGCT GGAGATAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu23733 | |
Clone ID Related Accession (Same CDS sequence) | NM_001294154.1 | |
Accession Version | NM_001294154.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 540bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-10 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane protein 196 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC164110.4 and AC225445.3. On Jun 26, 2014 this sequence version replaced XM_006515789.1. Transcript Variant: This variant (3) uses an alternate in-frame splice site in the 5' coding region and contains an alternate exon, which results in a frameshift, compared to variant 1. This results in a shorter protein (isoform 3), compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660821.112188.1, BB626213.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164132 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGCACCA GCGGCCAGAT CATTGGGAGC CTTTTGGTGC TCTCTGTGCT GGAGATAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001281083.1 |
CDS | 513..1052 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001294154.1 |
1 | ATGTGCACCA GCGGCCAGAT CATTGGGAGC CTTTTGGTGC TCTCTGTGCT GGAGATAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47795 | |
Clone ID Related Accession (Same CDS sequence) | XM_006515787.3 | |
Accession Version | XM_006515787.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 558bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | transmembrane protein 196 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006515787.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCACCA GCGGCCAGAT CATTGGGAGC CTTTTGGTGC TCTCTGTGCT GGAGATAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515850.1 |
CDS | 791..1348 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006515787.3 |
1 | ATGTGCACCA GCGGCCAGAT CATTGGGAGC CTTTTGGTGC TCTCTGTGCT GGAGATAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |