Gene Symbol | Atrip |
Entrez Gene ID | 235610 |
Full Name | ATR interacting protein |
Synonyms | 6620401K05Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Atrip cDNA ORF clone
gRNAs
Gene Symbol | Atrip |
Entrez Gene ID | 235610 |
Full Name | ATR interacting protein |
Synonyms | 6620401K05Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011242960.2 | XP_011241262.1 | ATR-interacting protein isoform X2 |
XM_017313350.1 | XP_017168839.1 | ATR-interacting protein isoform X3 |
NM_172774.3 | NP_766362.2 | ATR-interacting protein |
XM_006512072.2 | XP_006512135.1 | ATR-interacting protein isoform X1 |
Rattus norvegicus (Norway rat) | Atrip | NP_001100329.1 |
Danio rerio (zebrafish) | atrip | NP_001038332.1 |
Canis lupus familiaris (dog) | ATRIP | XP_005632647.1 |
Bos taurus (cattle) | ATRIP | NP_001096800.1 |
Homo sapiens (human) | ATRIP | NP_569055.1 |
ATRIP | XP_001112538.2 | |
Gallus gallus (chicken) | ATRIP | NP_001243080.1 |
Xenopus tropicalis (tropical clawed frog) | atrip | NP_001015895.2 |
Pan troglodytes (chimpanzee) | ATRIP | XP_001156485.2 |
Mus musculus (house mouse) | Atrip | NP_766362.2 |
Systematic screening for skin, hair, and nail abnormalities in a large-scale knockout mouse program.
Sundberg JP, Dadras SS, Silva KA, Kennedy VE, Garland G, Murray SA, Sundberg BA, Schofield PN, Pratt CH
PloS one12(7)e0180682(2017)
The Ddc2/ATRIP checkpoint protein monitors meiotic recombination intermediates.
Refolio E, Cavero S, Marcon E, Freire R, San-Segundo PA
Journal of cell science124(Pt 14)2488-500(2011 Jul)
Tel2 structure and function in the Hsp90-dependent maturation of mTOR and ATR complexes.
Takai H, Xie Y, de Lange T, Pavletich NP
Genes & development24(18)2019-30(2010 Sep)
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Atrip gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Atrip cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu43388 | |
Clone ID Related Accession (Same CDS sequence) | XM_017313350.1 | |
Accession Version | XM_017313350.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1764bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | ATR-interacting protein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000075.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATGAGT TAAGGACAAA GTCTCAGAGC AACGGACGAA CAAATAAGCC AGCCGCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017168839.1 |
CDS | 810..2573 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAATGAGT TAAGGACAAA GTCTCAGAGC AACGGACGAA CAAATAAGCC AGCCGCTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu73846 | |
Clone ID Related Accession (Same CDS sequence) | XM_011242960.2 | |
Accession Version | XM_011242960.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1968bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | ATR-interacting protein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000075.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011242960.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAGAAG AAATCCTAAT TAAGAATGGA GAAATTAAAA TTTTGCGTGA CTCTCTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011241262.1 |
CDS | 973..2940 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAGAAG AAATCCTAAT TAAGAATGGA GAAATTAAAA TTTTGCGTGA CTCTCTGCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04036 | |
Clone ID Related Accession (Same CDS sequence) | NM_172774.3 | |
Accession Version | NM_172774.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-27 | |
Organism | Mus musculus(house mouse) | |
Product | ATR-interacting protein | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BB649616.1, AK031257.1 and AC140383.2. On Jan 7, 2010 this sequence version replaced NM_172774.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK031257.1, SRR7345562.1527298.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCCGGGA CCCCCGCACC GAACAGCCAC AGGAAACAGA GTGGCGGCCT GGAGCCTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_766362.2 |
CDS | 121..2478 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCCGGGA CCCCCGCACC GAACAGCCAC AGGAAACAGA GTGGCGGCCT GGAGCCTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu43387 | |
Clone ID Related Accession (Same CDS sequence) | XM_006512072.2 | |
Accession Version | XM_006512072.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2127bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | ATR-interacting protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000075.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006512072.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTCCC ATTTAGATGG TGCTCATAAG GTCCGCCGAT TAGATGGGTT ACCAAATAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006512135.1 |
CDS | 472..2598 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCTCCC ATTTAGATGG TGCTCATAAG GTCCGCCGAT TAGATGGGTT ACCAAATAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Systematic screening for skin, hair, and nail abnormalities in a large-scale knockout mouse program. |
The Ddc2/ATRIP checkpoint protein monitors meiotic recombination intermediates. |
Tel2 structure and function in the Hsp90-dependent maturation of mTOR and ATR complexes. |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |