Gene Symbol | atrip |
Entrez Gene ID | 100101245 |
Full Name | ATR interacting protein |
Synonyms | Xatrip,trex1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » atrip cDNA ORF clone
gRNAs
Gene Symbol | atrip |
Entrez Gene ID | 100101245 |
Full Name | ATR interacting protein |
Synonyms | Xatrip,trex1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
XM_012960391.2 | XP_012815845.1 | ATR-interacting protein isoform X1 |
XM_012960391.3 | XP_012815845.2 | ATR-interacting protein isoform X1 |
NM_001015895.3 | NP_001015895.2 | ATR-interacting protein |
XM_012960393.2 | XP_012815847.1 | ATR-interacting protein isoform X1 |
XM_012960393.3 | XP_012815847.2 | ATR-interacting protein isoform X1 |
Rattus norvegicus (Norway rat) | Atrip | NP_001100329.1 |
Danio rerio (zebrafish) | atrip | NP_001038332.1 |
Canis lupus familiaris (dog) | ATRIP | XP_005632647.1 |
Bos taurus (cattle) | ATRIP | NP_001096800.1 |
Homo sapiens (human) | ATRIP | NP_569055.1 |
ATRIP | XP_001112538.2 | |
Gallus gallus (chicken) | ATRIP | NP_001243080.1 |
Xenopus tropicalis (tropical clawed frog) | atrip | NP_001015895.2 |
Pan troglodytes (chimpanzee) | ATRIP | XP_001156485.2 |
Mus musculus (house mouse) | Atrip | NP_766362.2 |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following atrip gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the atrip cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa22285 | |
Clone ID Related Accession (Same CDS sequence) | NM_001015895.3 | |
Accession Version | NM_001015895.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2211bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ATR-interacting protein | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125757.1. On Jul 3, 2007 this sequence version replaced NM_001015895.2. ##Evidence-Data-START## Transcript exon combination :: BC125757.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00028290, SAMD00028291 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGACGACC CTTTTGATGA CAATGAAGAT TTTACAGCTG ACGACCTGGA GGAGATTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001015895.2 |
CDS | 348..2558 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGACGACC CTTTTGATGA CAATGAAGAT TTTACAGCTG ACGACCTGGA GGAGATTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa30200 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960391.2 , XM_012960393.2 | |
Accession Version | XM_012960391.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2391bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ATR-interacting protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030680.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012960391.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGTTA ACCCCTTGTT TGCTAATAAG AAAAGGGAAA GCTCCATATT GTACAACACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815845.1 |
CDS | 272..2662 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCTGTTA ACCCCTTGTT TGCTAATAAG AAAAGGGAAA GCTCCATATT GTACAACACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa30200 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960391.2 , XM_012960393.2 | |
Accession Version | XM_012960393.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2391bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ATR-interacting protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030680.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012960393.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGTTA ACCCCTTGTT TGCTAATAAG AAAAGGGAAA GCTCCATATT GTACAACACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815847.1 |
CDS | 88..2478 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCTGTTA ACCCCTTGTT TGCTAATAAG AAAAGGGAAA GCTCCATATT GTACAACACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa55632 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960391.3 , XM_012960393.3 | |
Accession Version | XM_012960391.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2391bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ATR-interacting protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030680.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012960391.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGTTA ACCCCTTGTT TGCTAATAAG AAAAGGGAAA GCTCCATATT GTACAACACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815845.2 |
CDS | 45..2435 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCTGTTA ACCCCTTGTT TGCTAATAAG AAAAGGGAAA GCTCCATATT GTACAACACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa55632 | |
Clone ID Related Accession (Same CDS sequence) | XM_012960391.3 , XM_012960393.3 | |
Accession Version | XM_012960393.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2391bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ATR-interacting protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030680.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012960393.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGTTA ACCCCTTGTT TGCTAATAAG AAAAGGGAAA GCTCCATATT GTACAACACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012815847.2 |
CDS | 45..2435 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCTGTTA ACCCCTTGTT TGCTAATAAG AAAAGGGAAA GCTCCATATT GTACAACACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |