Gene Symbol | A130010J15Rik |
Entrez Gene ID | 319266 |
Full Name | RIKEN cDNA A130010J15 gene |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » A130010J15Rik cDNA ORF clone
gRNAs
Gene Symbol | A130010J15Rik |
Entrez Gene ID | 319266 |
Full Name | RIKEN cDNA A130010J15 gene |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006497253.3 | XP_006497316.1 | UPF0739 protein C1orf74 homolog isoform X1 |
NM_001160360.1 | NP_001153832.1 | UPF0739 protein C1orf74 homolog |
XM_006497253.2 | XP_006497316.1 | UPF0739 protein C1orf74 homolog isoform X1 |
NM_001160359.1 | NP_001153831.1 | UPF0739 protein C1orf74 homolog |
XM_006497253.4 | XP_006497316.1 | UPF0739 protein C1orf74 homolog isoform X1 |
NM_181048.3 | NP_851391.1 | UPF0739 protein C1orf74 homolog |
Homo sapiens (human) | C1orf74 | NP_689698.1 |
Gallus gallus (chicken) | C1ORF74 | XP_001235153.1 |
LOC713029 | XP_001110409.1 | |
Mus musculus (house mouse) | A130010J15Rik | NP_001153831.1 |
Bos taurus (cattle) | C16H1orf74 | NP_001093811.1 |
Danio rerio (zebrafish) | zgc:112163 | NP_001017723.1 |
Pan troglodytes (chimpanzee) | C1H1orf74 | XP_514167.1 |
Xenopus tropicalis (tropical clawed frog) | c1orf74 | NP_001011022.2 |
Canis lupus familiaris (dog) | C7H1orf74 | XP_005622388.1 |
Rattus norvegicus (Norway rat) | LOC100125367 | NP_001096827.1 |
The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis.
Sansom SN, Griffiths DS, Faedo A, Kleinjan DJ, Ruan Y, Smith J, van Heyningen V, Rubenstein JL, Livesey FJ
PLoS genetics5(6)e1000511(2009 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following A130010J15Rik gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the A130010J15Rik cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu15585 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497253.3 , NM_001160360.1 , XM_006497253.2 , NM_001160359.1 , XM_006497253.4 , NM_181048.3 | |
Accession Version | NM_001160360.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 792bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-20 | |
Organism | Mus musculus(house mouse) | |
Product | UPF0739 protein C1orf74 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK077339.1 and AL365322.10. Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. All three variants encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK077339.1, BB617998.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849380, SAMN01164136 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001153832.1 |
CDS | 140..931 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu15585 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497253.3 , NM_001160360.1 , XM_006497253.2 , NM_001160359.1 , XM_006497253.4 , NM_181048.3 | |
Accession Version | NM_001160359.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 792bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-19 | |
Organism | Mus musculus(house mouse) | |
Product | UPF0739 protein C1orf74 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY011244.1, BB858416.1 and AL365322.10. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. All three variants encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BB858416.1, AW213391.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849378 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001153831.1 |
CDS | 292..1083 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu15585 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497253.3 , NM_001160360.1 , XM_006497253.2 , NM_001160359.1 , XM_006497253.4 , NM_181048.3 | |
Accession Version | NM_181048.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 792bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-19 | |
Organism | Mus musculus(house mouse) | |
Product | UPF0739 protein C1orf74 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY011244.1, AK037364.1 and AL365322.10. On May 21, 2009 this sequence version replaced NM_181048.2. Transcript Variant: This variant (1) represents the longest transcript. All three variants encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BY011244.1, SRR1660819.165371.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_851391.1 |
CDS | 302..1093 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu15585 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497253.3 , NM_001160360.1 , XM_006497253.2 , NM_001160359.1 , XM_006497253.4 , NM_181048.3 | |
Accession Version | XM_006497253.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 792bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | UPF0739 protein C1orf74 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000067.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006497253.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006497316.1 |
CDS | 695..1486 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu15585 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497253.3 , NM_001160360.1 , XM_006497253.2 , NM_001160359.1 , XM_006497253.4 , NM_181048.3 | |
Accession Version | XM_006497253.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 792bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-08 | |
Organism | Mus musculus(House mouse) | |
Product | UPF0739 protein C1orf74 homolog isoform X1 | |
Comment |
1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006497316.1 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu15585 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497253.3 , NM_001160360.1 , XM_006497253.2 , NM_001160359.1 , XM_006497253.4 , NM_181048.3 | |
Accession Version | XM_006497253.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 792bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | UPF0739 protein C1orf74 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000067.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006497253.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006497316.1 |
CDS | 692..1483 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCAACAC CAAGCCCTCA GCTGCTGGTG GCAGCTGCTC AGCAGACTCT GGGCATGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis. |