Gene Symbol
Tmem53
Entrez Gene ID
68777
Full Name
transmembrane protein 53
Synonyms
1110038M16Rik,1500001P22Rik,1700012A05Rik
General protein information
Preferred Namestransmembrane protein 53
Namestransmembrane protein 53
Gene Type
protein-coding
Organism
Mus musculus(house mouse)
Genome
Chromosome: 4
Map Location: 4|4 D1
mRNA and Protein(s)
mRNA
Protein
Name
NM_001285815.1
NP_001272744.1
transmembrane protein 53 isoform d
NM_029589.1
NP_083865.1
transmembrane protein 53 isoform c
NM_001285812.1
NP_001272741.1
transmembrane protein 53 isoform a
NM_026837.3
NP_081113.1
transmembrane protein 53 isoform b
XM_030253755.1
XP_030109615.1
transmembrane protein 53 isoform X1
NM_001285814.1
NP_001272743.1
transmembrane protein 53 isoform c
NM_001285816.1
NP_001272745.1
transmembrane protein 53 isoform d
TMEM53
XP_002801564.1
Bos taurus (cattle)
TMEM53
NP_001033661.1
Mus musculus (house mouse)
Tmem53
NP_001272741.1
Rattus norvegicus (Norway rat)
Tmem53
NP_001101434.1
Danio rerio (zebrafish)
tmem53
NP_001002637.1
Oryza sativa (rice)
Os06g0730300
NP_001058655.1
Xenopus tropicalis (tropical clawed frog)
tmem53
NP_001107322.1
Caenorhabditis elegans (roundworm)
C09B8.4
NP_509006.2
Pan troglodytes (chimpanzee)
TMEM53
XP_513099.3
Gallus gallus (chicken)
TMEM53
NP_001264509.1
Homo sapiens (human)
TMEM53
NP_078863.2
Caenorhabditis elegans (roundworm)
T10B11.6
NP_491980.1
Caenorhabditis elegans (roundworm)
T24H10.4
NP_495945.2
Arabidopsis thaliana (thale cress)
AT3G19970
NP_566652.1
Canis lupus familiaris (dog)
TMEM53
XP_005629146.1
Drosophila melanogaster (fruit fly)
CG8245
NP_610178.2
Anopheles gambiae (African malaria mosquito)
AgaP_AGAP009586
XP_318608.3
Related articles in PubMed
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Tmem53 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tmem53 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OMu17312
Clone ID Related Accession (Same CDS sequence)
NM_001285812.1
Accession Version
NM_001285812.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 852bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-02-23
Organism
Mus musculus(house mouse)
Product
transmembrane protein 53 isoform a
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL671866.8, AK004164.1, AW049729.1 and AL844169.6.
Transcript Variant: This variant (1) encodes the longest isoform (a).
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
##Evidence-Data-START##
Transcript exon combination :: BC020121.1, BF164608.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 ATGGCCTCGG CCGAGCTGGA TTACAGCATC GAGATCCCGG ATCAGCCCTG CTGGAGCCAG AGTATGGAGG GGGATTGGGA AGAGAACAGA CAAGGTGGGA AGGAAGCTGG GAAGCAACAG CCTGTGGTGA TTCTCTTGGG CTGGGGAGGC TGCAGGGACA AGAACCTGGC CAAGTATAGT GCTATCTACC ACAAAAGGGG CTGCATTGTG ATCCGATACA CGGCCCCCTG GCACATGGTC TTCTTCTCTG AGTCCTTGGG CATCCCTTCA CTTCGCGTGA TAGCCCAGAA ACTGCTGGAG CTCCTCTTTG ACTATGAGAT TGAGCGGGAG CCTCTGCTCT TCCACGTCTT CAGCAATGCC GGCGTCATGC TCTACCGCTA CGTGCTGGAG CTCCTACAGA CCCACCAGCG CTTCCGCCAT TTGCATGTGG TGGGCACCAT CTTTGACAGT GGTCCTGGCG ATAGCAACCT GATAGGGGCC CTGAGGGCTC TGGCAACCAT CCTGGAGCGC CGACCTGCGG TGCTGCGCCT GTTGCTCCTG GCAGCATTTG CCCTGGTGGT GATCCTGTTT CACTTCCTGC TTGCTCCATT CACTGCCCTC TTCCACACCC ACTTCTACGA CAGGCTGCAG GACTCAGGCT CCTGCTGGCC TGAACTCTAC CTCTACTCTA GAGCTGATAA GGTGGTCTCG GCCAGGGATG TGGAACGTAT GGTAGAGGCA CGCCTGGCTC ACCAGGTCAT GGTGCGTGGA GTGGACTTTG TGTCATCTGC GCATGTCAGC CACCTCCGAG ACTATCCTAC TTACTATACA AGTCTGTGTG TTGACTTCAT GCATAATTGT GTCCAATGCT GA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001272741.1
CDS 124..975
Translation
Target ORF information:
RefSeq Version NM_001285812.1
Organism Mus musculus(house mouse)
Definition Mus musculus transmembrane protein 53 (Tmem53), transcript variant 1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001285812.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 ATGGCCTCGG CCGAGCTGGA TTACAGCATC GAGATCCCGG ATCAGCCCTG CTGGAGCCAG AGTATGGAGG GGGATTGGGA AGAGAACAGA CAAGGTGGGA AGGAAGCTGG GAAGCAACAG CCTGTGGTGA TTCTCTTGGG CTGGGGAGGC TGCAGGGACA AGAACCTGGC CAAGTATAGT GCTATCTACC ACAAAAGGGG CTGCATTGTG ATCCGATACA CGGCCCCCTG GCACATGGTC TTCTTCTCTG AGTCCTTGGG CATCCCTTCA CTTCGCGTGA TAGCCCAGAA ACTGCTGGAG CTCCTCTTTG ACTATGAGAT TGAGCGGGAG CCTCTGCTCT TCCACGTCTT CAGCAATGCC GGCGTCATGC TCTACCGCTA CGTGCTGGAG CTCCTACAGA CCCACCAGCG CTTCCGCCAT TTGCATGTGG TGGGCACCAT CTTTGACAGT GGTCCTGGCG ATAGCAACCT GATAGGGGCC CTGAGGGCTC TGGCAACCAT CCTGGAGCGC CGACCTGCGG TGCTGCGCCT GTTGCTCCTG GCAGCATTTG CCCTGGTGGT GATCCTGTTT CACTTCCTGC TTGCTCCATT CACTGCCCTC TTCCACACCC ACTTCTACGA CAGGCTGCAG GACTCAGGCT CCTGCTGGCC TGAACTCTAC CTCTACTCTA GAGCTGATAA GGTGGTCTCG GCCAGGGATG TGGAACGTAT GGTAGAGGCA CGCCTGGCTC ACCAGGTCAT GGTGCGTGGA GTGGACTTTG TGTCATCTGC GCATGTCAGC CACCTCCGAG ACTATCCTAC TTACTATACA AGTCTGTGTG TTGACTTCAT GCATAATTGT GTCCAATGCT GA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu17356
Clone ID Related Accession (Same CDS sequence)
NM_029589.1
, NM_001285814.1
Accession Version
NM_029589.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 786bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-02-23
Organism
Mus musculus(house mouse)
Product
transmembrane protein 53 isoform c
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK005885.1, AK005104.1 and AL844169.6.
Transcript Variant: This variant (3) includes alternate 5' exon structure and it thus differs in its 5' UTR and 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (c) has a distinct and shorter N-terminus, compared to isoform a. Both variants 3 and 4 encode isoform c.
##Evidence-Data-START##
Transcript exon combination :: AK005885.1, BY706028.1 [ECO:0000332]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 ATGAATCCTG ATGGAAAGAA CAGACAAGGT GGGAAGGAAG CTGGGAAGCA ACAGCCTGTG GTGATTCTCT TGGGCTGGGG AGGCTGCAGG GACAAGAACC TGGCCAAGTA TAGTGCTATC TACCACAAAA GGGGCTGCAT TGTGATCCGA TACACGGCCC CCTGGCACAT GGTCTTCTTC TCTGAGTCCT TGGGCATCCC TTCACTTCGC GTGATAGCCC AGAAACTGCT GGAGCTCCTC TTTGACTATG AGATTGAGCG GGAGCCTCTG CTCTTCCACG TCTTCAGCAA TGCCGGCGTC ATGCTCTACC GCTACGTGCT GGAGCTCCTA CAGACCCACC AGCGCTTCCG CCATTTGCAT GTGGTGGGCA CCATCTTTGA CAGTGGTCCT GGCGATAGCA ACCTGATAGG GGCCCTGAGG GCTCTGGCAA CCATCCTGGA GCGCCGACCT GCGGTGCTGC GCCTGTTGCT CCTGGCAGCA TTTGCCCTGG TGGTGATCCT GTTTCACTTC CTGCTTGCTC CATTCACTGC CCTCTTCCAC ACCCACTTCT ACGACAGGCT GCAGGACTCA GGCTCCTGCT GGCCTGAACT CTACCTCTAC TCTAGAGCTG ATAAGGTGGT CTCGGCCAGG GATGTGGAAC GTATGGTAGA GGCACGCCTG GCTCACCAGG TCATGGTGCG TGGAGTGGAC TTTGTGTCAT CTGCGCATGT CAGCCACCTC CGAGACTATC CTACTTACTA TACAAGTCTG TGTGTTGACT TCATGCATAA TTGTGTCCAA TGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_083865.1
CDS 91..876
Translation
Target ORF information:
RefSeq Version NM_029589.1
Organism Mus musculus(house mouse)
Definition Mus musculus transmembrane protein 53 (Tmem53), transcript variant 3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_029589.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 ATGAATCCTG ATGGAAAGAA CAGACAAGGT GGGAAGGAAG CTGGGAAGCA ACAGCCTGTG GTGATTCTCT TGGGCTGGGG AGGCTGCAGG GACAAGAACC TGGCCAAGTA TAGTGCTATC TACCACAAAA GGGGCTGCAT TGTGATCCGA TACACGGCCC CCTGGCACAT GGTCTTCTTC TCTGAGTCCT TGGGCATCCC TTCACTTCGC GTGATAGCCC AGAAACTGCT GGAGCTCCTC TTTGACTATG AGATTGAGCG GGAGCCTCTG CTCTTCCACG TCTTCAGCAA TGCCGGCGTC ATGCTCTACC GCTACGTGCT GGAGCTCCTA CAGACCCACC AGCGCTTCCG CCATTTGCAT GTGGTGGGCA CCATCTTTGA CAGTGGTCCT GGCGATAGCA ACCTGATAGG GGCCCTGAGG GCTCTGGCAA CCATCCTGGA GCGCCGACCT GCGGTGCTGC GCCTGTTGCT CCTGGCAGCA TTTGCCCTGG TGGTGATCCT GTTTCACTTC CTGCTTGCTC CATTCACTGC CCTCTTCCAC ACCCACTTCT ACGACAGGCT GCAGGACTCA GGCTCCTGCT GGCCTGAACT CTACCTCTAC TCTAGAGCTG ATAAGGTGGT CTCGGCCAGG GATGTGGAAC GTATGGTAGA GGCACGCCTG GCTCACCAGG TCATGGTGCG TGGAGTGGAC TTTGTGTCAT CTGCGCATGT CAGCCACCTC CGAGACTATC CTACTTACTA TACAAGTCTG TGTGTTGACT TCATGCATAA TTGTGTCCAA TGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu17356
Clone ID Related Accession (Same CDS sequence)
NM_029589.1
, NM_001285814.1
Accession Version
NM_001285814.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 786bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-02-23
Organism
Mus musculus(house mouse)
Product
transmembrane protein 53 isoform c
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL671866.8, AK004164.1, AW049729.1 and AL844169.6.
Transcript Variant: This variant (4) differs in its 5' UTR and 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (c) has a distinct and shorter N-terminus, compared to isoform a. Both variants 3 and 4 encode isoform c.
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
##Evidence-Data-START##
Transcript exon combination :: BQ928065.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849384, SAMN00849385 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 ATGAATCCTG ATGGAAAGAA CAGACAAGGT GGGAAGGAAG CTGGGAAGCA ACAGCCTGTG GTGATTCTCT TGGGCTGGGG AGGCTGCAGG GACAAGAACC TGGCCAAGTA TAGTGCTATC TACCACAAAA GGGGCTGCAT TGTGATCCGA TACACGGCCC CCTGGCACAT GGTCTTCTTC TCTGAGTCCT TGGGCATCCC TTCACTTCGC GTGATAGCCC AGAAACTGCT GGAGCTCCTC TTTGACTATG AGATTGAGCG GGAGCCTCTG CTCTTCCACG TCTTCAGCAA TGCCGGCGTC ATGCTCTACC GCTACGTGCT GGAGCTCCTA CAGACCCACC AGCGCTTCCG CCATTTGCAT GTGGTGGGCA CCATCTTTGA CAGTGGTCCT GGCGATAGCA ACCTGATAGG GGCCCTGAGG GCTCTGGCAA CCATCCTGGA GCGCCGACCT GCGGTGCTGC GCCTGTTGCT CCTGGCAGCA TTTGCCCTGG TGGTGATCCT GTTTCACTTC CTGCTTGCTC CATTCACTGC CCTCTTCCAC ACCCACTTCT ACGACAGGCT GCAGGACTCA GGCTCCTGCT GGCCTGAACT CTACCTCTAC TCTAGAGCTG ATAAGGTGGT CTCGGCCAGG GATGTGGAAC GTATGGTAGA GGCACGCCTG GCTCACCAGG TCATGGTGCG TGGAGTGGAC TTTGTGTCAT CTGCGCATGT CAGCCACCTC CGAGACTATC CTACTTACTA TACAAGTCTG TGTGTTGACT TCATGCATAA TTGTGTCCAA TGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001272743.1
CDS 255..1040
Translation
Target ORF information:
RefSeq Version NM_001285814.1
Organism Mus musculus(house mouse)
Definition Mus musculus transmembrane protein 53 (Tmem53), transcript variant 4, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001285814.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 ATGAATCCTG ATGGAAAGAA CAGACAAGGT GGGAAGGAAG CTGGGAAGCA ACAGCCTGTG GTGATTCTCT TGGGCTGGGG AGGCTGCAGG GACAAGAACC TGGCCAAGTA TAGTGCTATC TACCACAAAA GGGGCTGCAT TGTGATCCGA TACACGGCCC CCTGGCACAT GGTCTTCTTC TCTGAGTCCT TGGGCATCCC TTCACTTCGC GTGATAGCCC AGAAACTGCT GGAGCTCCTC TTTGACTATG AGATTGAGCG GGAGCCTCTG CTCTTCCACG TCTTCAGCAA TGCCGGCGTC ATGCTCTACC GCTACGTGCT GGAGCTCCTA CAGACCCACC AGCGCTTCCG CCATTTGCAT GTGGTGGGCA CCATCTTTGA CAGTGGTCCT GGCGATAGCA ACCTGATAGG GGCCCTGAGG GCTCTGGCAA CCATCCTGGA GCGCCGACCT GCGGTGCTGC GCCTGTTGCT CCTGGCAGCA TTTGCCCTGG TGGTGATCCT GTTTCACTTC CTGCTTGCTC CATTCACTGC CCTCTTCCAC ACCCACTTCT ACGACAGGCT GCAGGACTCA GGCTCCTGCT GGCCTGAACT CTACCTCTAC TCTAGAGCTG ATAAGGTGGT CTCGGCCAGG GATGTGGAAC GTATGGTAGA GGCACGCCTG GCTCACCAGG TCATGGTGCG TGGAGTGGAC TTTGTGTCAT CTGCGCATGT CAGCCACCTC CGAGACTATC CTACTTACTA TACAAGTCTG TGTGTTGACT TCATGCATAA TTGTGTCCAA TGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu03137
Clone ID Related Accession (Same CDS sequence)
NM_026837.3
Accession Version
NM_026837.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 831bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-02-23
Organism
Mus musculus(house mouse)
Product
transmembrane protein 53 isoform b
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL671866.8, AK004164.1, AW049729.1 and AL844169.6. On Oct 23, 2013 this sequence version replaced NM_026837.2.
Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (b) that is shorter than isoform a.
##Evidence-Data-START##
Transcript exon combination :: BI248980.1, BY704409.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 ATGGCCTCGG CCGAGCTGGA TTACAGCATC GAGATCCCGG ATCAGCCCTG CTGGAGCCAG AAGAACAGAC AAGGTGGGAA GGAAGCTGGG AAGCAACAGC CTGTGGTGAT TCTCTTGGGC TGGGGAGGCT GCAGGGACAA GAACCTGGCC AAGTATAGTG CTATCTACCA CAAAAGGGGC TGCATTGTGA TCCGATACAC GGCCCCCTGG CACATGGTCT TCTTCTCTGA GTCCTTGGGC ATCCCTTCAC TTCGCGTGAT AGCCCAGAAA CTGCTGGAGC TCCTCTTTGA CTATGAGATT GAGCGGGAGC CTCTGCTCTT CCACGTCTTC AGCAATGCCG GCGTCATGCT CTACCGCTAC GTGCTGGAGC TCCTACAGAC CCACCAGCGC TTCCGCCATT TGCATGTGGT GGGCACCATC TTTGACAGTG GTCCTGGCGA TAGCAACCTG ATAGGGGCCC TGAGGGCTCT GGCAACCATC CTGGAGCGCC GACCTGCGGT GCTGCGCCTG TTGCTCCTGG CAGCATTTGC CCTGGTGGTG ATCCTGTTTC ACTTCCTGCT TGCTCCATTC ACTGCCCTCT TCCACACCCA CTTCTACGAC AGGCTGCAGG ACTCAGGCTC CTGCTGGCCT GAACTCTACC TCTACTCTAG AGCTGATAAG GTGGTCTCGG CCAGGGATGT GGAACGTATG GTAGAGGCAC GCCTGGCTCA CCAGGTCATG GTGCGTGGAG TGGACTTTGT GTCATCTGCG CATGTCAGCC ACCTCCGAGA CTATCCTACT TACTATACAA GTCTGTGTGT TGACTTCATG CATAATTGTG TCCAATGCTG A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_081113.1
CDS 124..954
Translation
Target ORF information:
RefSeq Version NM_026837.3
Organism Mus musculus(house mouse)
Definition Mus musculus transmembrane protein 53 (Tmem53), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_026837.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 ATGGCCTCGG CCGAGCTGGA TTACAGCATC GAGATCCCGG ATCAGCCCTG CTGGAGCCAG AAGAACAGAC AAGGTGGGAA GGAAGCTGGG AAGCAACAGC CTGTGGTGAT TCTCTTGGGC TGGGGAGGCT GCAGGGACAA GAACCTGGCC AAGTATAGTG CTATCTACCA CAAAAGGGGC TGCATTGTGA TCCGATACAC GGCCCCCTGG CACATGGTCT TCTTCTCTGA GTCCTTGGGC ATCCCTTCAC TTCGCGTGAT AGCCCAGAAA CTGCTGGAGC TCCTCTTTGA CTATGAGATT GAGCGGGAGC CTCTGCTCTT CCACGTCTTC AGCAATGCCG GCGTCATGCT CTACCGCTAC GTGCTGGAGC TCCTACAGAC CCACCAGCGC TTCCGCCATT TGCATGTGGT GGGCACCATC TTTGACAGTG GTCCTGGCGA TAGCAACCTG ATAGGGGCCC TGAGGGCTCT GGCAACCATC CTGGAGCGCC GACCTGCGGT GCTGCGCCTG TTGCTCCTGG CAGCATTTGC CCTGGTGGTG ATCCTGTTTC ACTTCCTGCT TGCTCCATTC ACTGCCCTCT TCCACACCCA CTTCTACGAC AGGCTGCAGG ACTCAGGCTC CTGCTGGCCT GAACTCTACC TCTACTCTAG AGCTGATAAG GTGGTCTCGG CCAGGGATGT GGAACGTATG GTAGAGGCAC GCCTGGCTCA CCAGGTCATG GTGCGTGGAG TGGACTTTGT GTCATCTGCG CATGTCAGCC ACCTCCGAGA CTATCCTACT TACTATACAA GTCTGTGTGT TGACTTCATG CATAATTGTG TCCAATGCTG A
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu08888
Clone ID Related Accession (Same CDS sequence)
NM_001285815.1
, XM_030253755.1
, NM_001285816.1
Accession Version
NM_001285815.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 618bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-02-23
Organism
Mus musculus(house mouse)
Product
transmembrane protein 53 isoform d
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL671866.8, BE647557.1, AK004164.1, AW049729.1 and AL844169.6.
Transcript Variant: This variant (5) differs in its 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (d) is shorter at the N-terminus, compared to isoform a. Both variants 5 and 6 encode isoform d.
##Evidence-Data-START##
CDS exon combination :: BI248980.1, AI429067.1 [ECO:0000331]
RNAseq introns :: mixed/partial sample support SAMN00849386 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 ATGGTCTTCT TCTCTGAGTC CTTGGGCATC CCTTCACTTC GCGTGATAGC CCAGAAACTG CTGGAGCTCC TCTTTGACTA TGAGATTGAG CGGGAGCCTC TGCTCTTCCA CGTCTTCAGC AATGCCGGCG TCATGCTCTA CCGCTACGTG CTGGAGCTCC TACAGACCCA CCAGCGCTTC CGCCATTTGC ATGTGGTGGG CACCATCTTT GACAGTGGTC CTGGCGATAG CAACCTGATA GGGGCCCTGA GGGCTCTGGC AACCATCCTG GAGCGCCGAC CTGCGGTGCT GCGCCTGTTG CTCCTGGCAG CATTTGCCCT GGTGGTGATC CTGTTTCACT TCCTGCTTGC TCCATTCACT GCCCTCTTCC ACACCCACTT CTACGACAGG CTGCAGGACT CAGGCTCCTG CTGGCCTGAA CTCTACCTCT ACTCTAGAGC TGATAAGGTG GTCTCGGCCA GGGATGTGGA ACGTATGGTA GAGGCACGCC TGGCTCACCA GGTCATGGTG CGTGGAGTGG ACTTTGTGTC ATCTGCGCAT GTCAGCCACC TCCGAGACTA TCCTACTTAC TATACAAGTC TGTGTGTTGA CTTCATGCAT AATTGTGTCC AATGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001272744.1
CDS 441..1058
Translation
Target ORF information:
RefSeq Version NM_001285815.1
Organism Mus musculus(house mouse)
Definition Mus musculus transmembrane protein 53 (Tmem53), transcript variant 5, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001285815.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 ATGGTCTTCT TCTCTGAGTC CTTGGGCATC CCTTCACTTC GCGTGATAGC CCAGAAACTG CTGGAGCTCC TCTTTGACTA TGAGATTGAG CGGGAGCCTC TGCTCTTCCA CGTCTTCAGC AATGCCGGCG TCATGCTCTA CCGCTACGTG CTGGAGCTCC TACAGACCCA CCAGCGCTTC CGCCATTTGC ATGTGGTGGG CACCATCTTT GACAGTGGTC CTGGCGATAG CAACCTGATA GGGGCCCTGA GGGCTCTGGC AACCATCCTG GAGCGCCGAC CTGCGGTGCT GCGCCTGTTG CTCCTGGCAG CATTTGCCCT GGTGGTGATC CTGTTTCACT TCCTGCTTGC TCCATTCACT GCCCTCTTCC ACACCCACTT CTACGACAGG CTGCAGGACT CAGGCTCCTG CTGGCCTGAA CTCTACCTCT ACTCTAGAGC TGATAAGGTG GTCTCGGCCA GGGATGTGGA ACGTATGGTA GAGGCACGCC TGGCTCACCA GGTCATGGTG CGTGGAGTGG ACTTTGTGTC ATCTGCGCAT GTCAGCCACC TCCGAGACTA TCCTACTTAC TATACAAGTC TGTGTGTTGA CTTCATGCAT AATTGTGTCC AATGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu08888
Clone ID Related Accession (Same CDS sequence)
NM_001285815.1
, XM_030253755.1
, NM_001285816.1
Accession Version
NM_001285816.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 618bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-02-23
Organism
Mus musculus(house mouse)
Product
transmembrane protein 53 isoform d
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL671866.8, AK004164.1, AW049729.1 and AL844169.6.
Transcript Variant: This variant (6) lacks a portion of the 5' coding region and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (d) is shorter at the N-terminus, compared to isoform a. Both variants 5 and 6 encode isoform d.
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
##Evidence-Data-START##
Transcript exon combination :: BF123463.1, AA869708.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 ATGGTCTTCT TCTCTGAGTC CTTGGGCATC CCTTCACTTC GCGTGATAGC CCAGAAACTG CTGGAGCTCC TCTTTGACTA TGAGATTGAG CGGGAGCCTC TGCTCTTCCA CGTCTTCAGC AATGCCGGCG TCATGCTCTA CCGCTACGTG CTGGAGCTCC TACAGACCCA CCAGCGCTTC CGCCATTTGC ATGTGGTGGG CACCATCTTT GACAGTGGTC CTGGCGATAG CAACCTGATA GGGGCCCTGA GGGCTCTGGC AACCATCCTG GAGCGCCGAC CTGCGGTGCT GCGCCTGTTG CTCCTGGCAG CATTTGCCCT GGTGGTGATC CTGTTTCACT TCCTGCTTGC TCCATTCACT GCCCTCTTCC ACACCCACTT CTACGACAGG CTGCAGGACT CAGGCTCCTG CTGGCCTGAA CTCTACCTCT ACTCTAGAGC TGATAAGGTG GTCTCGGCCA GGGATGTGGA ACGTATGGTA GAGGCACGCC TGGCTCACCA GGTCATGGTG CGTGGAGTGG ACTTTGTGTC ATCTGCGCAT GTCAGCCACC TCCGAGACTA TCCTACTTAC TATACAAGTC TGTGTGTTGA CTTCATGCAT AATTGTGTCC AATGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001272745.1
CDS 221..838
Translation
Target ORF information:
RefSeq Version NM_001285816.1
Organism Mus musculus(house mouse)
Definition Mus musculus transmembrane protein 53 (Tmem53), transcript variant 6, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001285816.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 ATGGTCTTCT TCTCTGAGTC CTTGGGCATC CCTTCACTTC GCGTGATAGC CCAGAAACTG CTGGAGCTCC TCTTTGACTA TGAGATTGAG CGGGAGCCTC TGCTCTTCCA CGTCTTCAGC AATGCCGGCG TCATGCTCTA CCGCTACGTG CTGGAGCTCC TACAGACCCA CCAGCGCTTC CGCCATTTGC ATGTGGTGGG CACCATCTTT GACAGTGGTC CTGGCGATAG CAACCTGATA GGGGCCCTGA GGGCTCTGGC AACCATCCTG GAGCGCCGAC CTGCGGTGCT GCGCCTGTTG CTCCTGGCAG CATTTGCCCT GGTGGTGATC CTGTTTCACT TCCTGCTTGC TCCATTCACT GCCCTCTTCC ACACCCACTT CTACGACAGG CTGCAGGACT CAGGCTCCTG CTGGCCTGAA CTCTACCTCT ACTCTAGAGC TGATAAGGTG GTCTCGGCCA GGGATGTGGA ACGTATGGTA GAGGCACGCC TGGCTCACCA GGTCATGGTG CGTGGAGTGG ACTTTGTGTC ATCTGCGCAT GTCAGCCACC TCCGAGACTA TCCTACTTAC TATACAAGTC TGTGTGTTGA CTTCATGCAT AATTGTGTCC AATGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu08888
Clone ID Related Accession (Same CDS sequence)
NM_001285815.1
, XM_030253755.1
, NM_001285816.1
Accession Version
XM_030253755.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 618bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-08-07
Organism
Mus musculus(house mouse)
Product
transmembrane protein 53 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 ATGGTCTTCT TCTCTGAGTC CTTGGGCATC CCTTCACTTC GCGTGATAGC CCAGAAACTG CTGGAGCTCC TCTTTGACTA TGAGATTGAG CGGGAGCCTC TGCTCTTCCA CGTCTTCAGC AATGCCGGCG TCATGCTCTA CCGCTACGTG CTGGAGCTCC TACAGACCCA CCAGCGCTTC CGCCATTTGC ATGTGGTGGG CACCATCTTT GACAGTGGTC CTGGCGATAG CAACCTGATA GGGGCCCTGA GGGCTCTGGC AACCATCCTG GAGCGCCGAC CTGCGGTGCT GCGCCTGTTG CTCCTGGCAG CATTTGCCCT GGTGGTGATC CTGTTTCACT TCCTGCTTGC TCCATTCACT GCCCTCTTCC ACACCCACTT CTACGACAGG CTGCAGGACT CAGGCTCCTG CTGGCCTGAA CTCTACCTCT ACTCTAGAGC TGATAAGGTG GTCTCGGCCA GGGATGTGGA ACGTATGGTA GAGGCACGCC TGGCTCACCA GGTCATGGTG CGTGGAGTGG ACTTTGTGTC ATCTGCGCAT GTCAGCCACC TCCGAGACTA TCCTACTTAC TATACAAGTC TGTGTGTTGA CTTCATGCAT AATTGTGTCC AATGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_030109615.1
CDS 355..972
Translation
Target ORF information:
RefSeq Version XM_030253755.1
Organism Mus musculus(house mouse)
Definition Mus musculus transmembrane protein 53 (Tmem53), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_030253755.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 ATGGTCTTCT TCTCTGAGTC CTTGGGCATC CCTTCACTTC GCGTGATAGC CCAGAAACTG CTGGAGCTCC TCTTTGACTA TGAGATTGAG CGGGAGCCTC TGCTCTTCCA CGTCTTCAGC AATGCCGGCG TCATGCTCTA CCGCTACGTG CTGGAGCTCC TACAGACCCA CCAGCGCTTC CGCCATTTGC ATGTGGTGGG CACCATCTTT GACAGTGGTC CTGGCGATAG CAACCTGATA GGGGCCCTGA GGGCTCTGGC AACCATCCTG GAGCGCCGAC CTGCGGTGCT GCGCCTGTTG CTCCTGGCAG CATTTGCCCT GGTGGTGATC CTGTTTCACT TCCTGCTTGC TCCATTCACT GCCCTCTTCC ACACCCACTT CTACGACAGG CTGCAGGACT CAGGCTCCTG CTGGCCTGAA CTCTACCTCT ACTCTAGAGC TGATAAGGTG GTCTCGGCCA GGGATGTGGA ACGTATGGTA GAGGCACGCC TGGCTCACCA GGTCATGGTG CGTGGAGTGG ACTTTGTGTC ATCTGCGCAT GTCAGCCACC TCCGAGACTA TCCTACTTAC TATACAAGTC TGTGTGTTGA CTTCATGCAT AATTGTGTCC AATGCTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.