Gene Symbol | Tmem53 |
Entrez Gene ID | 313529 |
Full Name | transmembrane protein 53 |
Synonyms | RGD1307066 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Tmem53 cDNA ORF clone
gRNAs
Gene Symbol | Tmem53 |
Entrez Gene ID | 313529 |
Full Name | transmembrane protein 53 |
Synonyms | RGD1307066 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006238665.3 | XP_006238727.1 | transmembrane protein 53 isoform X1 |
XM_017593389.1 | XP_017448878.1 | transmembrane protein 53 isoform X2 |
XM_017593390.1 | XP_017448879.1 | transmembrane protein 53 isoform X2 |
XM_006238666.3 | XP_006238728.1 | transmembrane protein 53 isoform X2 |
NM_001107964.1 | NP_001101434.1 | transmembrane protein 53 |
TMEM53 | XP_002801564.1 | |
Bos taurus (cattle) | TMEM53 | NP_001033661.1 |
Mus musculus (house mouse) | Tmem53 | NP_001272741.1 |
Rattus norvegicus (Norway rat) | Tmem53 | NP_001101434.1 |
Danio rerio (zebrafish) | tmem53 | NP_001002637.1 |
Oryza sativa (rice) | Os06g0730300 | NP_001058655.1 |
Xenopus tropicalis (tropical clawed frog) | tmem53 | NP_001107322.1 |
Caenorhabditis elegans (roundworm) | C09B8.4 | NP_509006.2 |
Pan troglodytes (chimpanzee) | TMEM53 | XP_513099.3 |
Gallus gallus (chicken) | TMEM53 | NP_001264509.1 |
Homo sapiens (human) | TMEM53 | NP_078863.2 |
Caenorhabditis elegans (roundworm) | T10B11.6 | NP_491980.1 |
Caenorhabditis elegans (roundworm) | T24H10.4 | NP_495945.2 |
Arabidopsis thaliana (thale cress) | AT3G19970 | NP_566652.1 |
Canis lupus familiaris (dog) | TMEM53 | XP_005629146.1 |
Drosophila melanogaster (fruit fly) | CG8245 | NP_610178.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009586 | XP_318608.3 |
Proteomic characterization of the human sperm nucleus.
de Mateo S, Castillo J, Estanyol JM, Ballesc? JL, Oliva R
Proteomics11(13)2714-26(2011 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Tmem53 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tmem53 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa06376 | |
Clone ID Related Accession (Same CDS sequence) | NM_001107964.1 | |
Accession Version | NM_001107964.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transmembrane protein 53 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474008.2. On or before Oct 4, 2007 this sequence version replaced XM_001067384.1, XM_233431.4. ##Evidence-Data-START## Transcript exon combination :: FQ219156.1, CB718877.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCCTCGG CCGAGCTGGA TTACAGCATC GAGATCCCGG ATCAGCCCTG CTGGAGCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001101434.1 |
CDS | 89..919 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCCTCGG CCGAGCTGGA TTACAGCATC GAGATCCCGG ATCAGCCCTG CTGGAGCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28470 | |
Clone ID Related Accession (Same CDS sequence) | XM_006238665.3 | |
Accession Version | XM_006238665.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 786bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transmembrane protein 53 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006238665.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGAAC TGGAAAAGAA CAGCCAAGGT GGGAAGGAGG CCGGGAAGCA ACAGCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006238727.1 |
CDS | 198..983 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAGGAAC TGGAAAAGAA CAGCCAAGGT GGGAAGGAGG CCGGGAAGCA ACAGCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28471 | |
Clone ID Related Accession (Same CDS sequence) | XM_017593389.1 , XM_017593390.1 , XM_006238666.3 | |
Accession Version | XM_017593389.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transmembrane protein 53 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCTTCT TCTCTGAGTC CTTGGGCATT CCCTCACTTC GTGTGGTGGC CCAGAAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017448878.1 |
CDS | 362..979 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTCTTCT TCTCTGAGTC CTTGGGCATT CCCTCACTTC GTGTGGTGGC CCAGAAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28471 | |
Clone ID Related Accession (Same CDS sequence) | XM_017593389.1 , XM_017593390.1 , XM_006238666.3 | |
Accession Version | XM_017593390.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transmembrane protein 53 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCTTCT TCTCTGAGTC CTTGGGCATT CCCTCACTTC GTGTGGTGGC CCAGAAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017448879.1 |
CDS | 298..915 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTCTTCT TCTCTGAGTC CTTGGGCATT CCCTCACTTC GTGTGGTGGC CCAGAAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa28471 | |
Clone ID Related Accession (Same CDS sequence) | XM_017593389.1 , XM_017593390.1 , XM_006238666.3 | |
Accession Version | XM_006238666.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transmembrane protein 53 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005104.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006238666.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCTTCT TCTCTGAGTC CTTGGGCATT CCCTCACTTC GTGTGGTGGC CCAGAAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006238728.1 |
CDS | 126..743 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTCTTCT TCTCTGAGTC CTTGGGCATT CCCTCACTTC GTGTGGTGGC CCAGAAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Proteomic characterization of the human sperm nucleus. |