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TMEM53 cDNA ORF clone, Bos taurus(cattle)

Summary

Gene Symbol TMEM53
Entrez Gene ID 540738
Full Name transmembrane protein 53
General protein information
Preferred Names

transmembrane protein 53

Names

transmembrane protein 53
Gene Type protein-coding
Organism Bos taurus(cattle)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_024989647.1 XP_024845415.1 transmembrane protein 53 isoform X1
NM_001038572.1 NP_001033661.1 transmembrane protein 53

Pathways from BioSystems


Homologies


TMEM53 XP_002801564.1
Bos taurus (cattle) TMEM53 NP_001033661.1
Mus musculus (house mouse) Tmem53 NP_001272741.1
Rattus norvegicus (Norway rat) Tmem53 NP_001101434.1
Danio rerio (zebrafish) tmem53 NP_001002637.1
Oryza sativa (rice) Os06g0730300 NP_001058655.1
Xenopus tropicalis (tropical clawed frog) tmem53 NP_001107322.1
Caenorhabditis elegans (roundworm) C09B8.4 NP_509006.2
Pan troglodytes (chimpanzee) TMEM53 XP_513099.3
Gallus gallus (chicken) TMEM53 NP_001264509.1
Homo sapiens (human) TMEM53 NP_078863.2
Caenorhabditis elegans (roundworm) T10B11.6 NP_491980.1
Caenorhabditis elegans (roundworm) T24H10.4 NP_495945.2
Arabidopsis thaliana (thale cress) AT3G19970 NP_566652.1
Canis lupus familiaris (dog) TMEM53 XP_005629146.1
Drosophila melanogaster (fruit fly) CG8245 NP_610178.2
Anopheles gambiae (African malaria mosquito) AgaP_AGAP009586 XP_318608.3

Gene Ontology


Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following TMEM53 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TMEM53 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OBa42800 NM_001038572.1
Latest version!		 Bos taurus transmembrane protein 53 (TMEM53), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
OBa232947 XM_024989647.1
Latest version!		 Bos taurus transmembrane protein 53 (TMEM53), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $139.30
$199.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OBa42800
Clone ID Related Accession (Same CDS sequence) NM_001038572.1
Accession Version NM_001038572.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 885bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-10-19
Organism Bos taurus(cattle)
Product transmembrane protein 53
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC109854.1. On Jan 6, 2006 this sequence version replaced XM_612890.2. ##Evidence-Data-START## Transcript exon combination :: BC109854.1, EV670745.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCTTCAG CCCAGCTGGA CTACACCATC GAGATCCCTG ATCAGCCCTG CCGGAGTCAG 
GAGAACAGCC CTGACCAAGG TGGGAAGGAG GCTGGGACTC GACTGCCTTT GGTGATTCTC 
TTGGGCTGGG GAGGCTGCTC TGACAAGAAC CTGGCCAAGT ACAGTGCCAT CTATCACAAA 
AGGGGCTGCA TCGTCATCCG ATACACAGCC CCCTGGCACA TGGTCTTCTT CTCCGAGACC 
CTGGGCATCC CTTCACTTCG TGTCTTGGCC CAGAAGCTGC TTGAGCTGCT CTTTGATTAC 
GAGGTTGAGA AGGAGCCCCT GCTCTTCCAC GTCTTCAGCA ACGCTGGCGT CATGCTGTAC 
CGATATGTGC TGGAGCTCCT GCAGACCCAC CAGCGCTTCT GTCACCTGCG TGTGGTGGGC 
ACCATCTTTG ACAGCGGTCC TGGTGACAGC AACCTGCTGG GGGCTCTGCG GGCACTGGCA 
GTCGTCCTAG AGCACCGTCC TGCCGCGCTG CGCCTGCTGC TCCTGGTGGC CTTCACCCTG 
GTGGCCTTCC TGTTCCACGT CCTGCTCGCG CCACTCACTG CCCTCTTCCA CACGCACTTC 
TATGACAGGC TGCTCGACGC AGCCTCTCGC TGGCCCGAGC TCTACCTCTA CTCCAGGGCC 
GACGAGGTGG TCCTGGCCCG GGATGTGGAG CGCATGGTGG AGGCACGCCT GGCACACCAG 
GTCCTGGTAC GCTCCGTGGA CTTCGTGTCG TCTGCACACG TCAGCCACCT CCGCGACTAC 
CCTACTTATT ACACTACCCT CTGCATCAAC TTCATGCACA GCTGTGTCCA CTGCTCAGGT 
CCTTGCCCTC CCCACCTCAC TTCTGCTCCA GAAATAAATG CCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001033661.1
CDS43..927
Translation

Target ORF information:

RefSeq Version NM_001038572.1
Organism Bos taurus(cattle)
Definition Bos taurus transmembrane protein 53 (TMEM53), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001038572.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCTTCAG CCCAGCTGGA CTACACCATC GAGATCCCTG ATCAGCCCTG CCGGAGTCAG 
GAGAACAGCC CTGACCAAGG TGGGAAGGAG GCTGGGACTC GACTGCCTTT GGTGATTCTC 
TTGGGCTGGG GAGGCTGCTC TGACAAGAAC CTGGCCAAGT ACAGTGCCAT CTATCACAAA 
AGGGGCTGCA TCGTCATCCG ATACACAGCC CCCTGGCACA TGGTCTTCTT CTCCGAGACC 
CTGGGCATCC CTTCACTTCG TGTCTTGGCC CAGAAGCTGC TTGAGCTGCT CTTTGATTAC 
GAGGTTGAGA AGGAGCCCCT GCTCTTCCAC GTCTTCAGCA ACGCTGGCGT CATGCTGTAC 
CGATATGTGC TGGAGCTCCT GCAGACCCAC CAGCGCTTCT GTCACCTGCG TGTGGTGGGC 
ACCATCTTTG ACAGCGGTCC TGGTGACAGC AACCTGCTGG GGGCTCTGCG GGCACTGGCA 
GTCGTCCTAG AGCACCGTCC TGCCGCGCTG CGCCTGCTGC TCCTGGTGGC CTTCACCCTG 
GTGGCCTTCC TGTTCCACGT CCTGCTCGCG CCACTCACTG CCCTCTTCCA CACGCACTTC 
TATGACAGGC TGCTCGACGC AGCCTCTCGC TGGCCCGAGC TCTACCTCTA CTCCAGGGCC 
GACGAGGTGG TCCTGGCCCG GGATGTGGAG CGCATGGTGG AGGCACGCCT GGCACACCAG 
GTCCTGGTAC GCTCCGTGGA CTTCGTGTCG TCTGCACACG TCAGCCACCT CCGCGACTAC 
CCTACTTATT ACACTACCCT CTGCATCAAC TTCATGCACA GCTGTGTCCA CTGCTCAGGT 
CCTTGCCCTC CCCACCTCAC TTCTGCTCCA GAAATAAATG CCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OBa232947
Clone ID Related Accession (Same CDS sequence) XM_024989647.1
Accession Version XM_024989647.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 915bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-06
Organism Bos taurus(cattle)
Product transmembrane protein 53 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCTTCAG CCCAGCTGGA CTACACCATC GAGATCCCTG ATCAGCCCTG CCGGAGTCAG 
GGTATGGAAC GAGGGTTGGG TCCAGTCGTG GAGAACAGCC CTGACCAAGG TGGGAAGGAG 
GCTGGGACTC GACTGCCTTT GGTGATTCTC TTGGGCTGGG GAGGCTGCTC TGACAAGAAC 
CTGGCCAAGT ACAGTGCCAT CTATCACAAA AGGGGCTGCA TCGTCATCCG ATACACAGCC 
CCCTGGCACA TGGTCTTCTT CTCCGAGACC CTGGGCATCC CTTCACTTCG TGTCTTGGCC 
CAGAAGCTGC TTGAGCTGCT CTTTGATTAC GAGGTTGAGA AGGAGCCCCT GCTCTTCCAC 
GTCTTCAGCA ACGCTGGCGT CATGCTGTAC CGATATGTGC TGGAGCTCCT GCAGACCCAC 
CAGCGCTTCT GTCACCTGCG TGTGGTGGGC ACCATCTTTG ACAGCGGTCC TGGTGACAGC 
AACCTGCTGG GGGCTCTGCG GGCACTGGCA GTCGTCCTAG AGCACCGTCC TGCCGCGCTG 
CGCCTGCTGC TCCTGGTGGC CTTCACCCTG GTGGCCTTCC TGTTCCACGT CCTGCTCGCG 
CCACTCACTG CCCTCTTCCA CACGCACTTC TATGACAGGC TGCTCGACGC AGCCTCTCGC 
TGGCCCGAGC TCTACCTCTA CTCCAGGGCC GACGAGGTGG TCCTGGCCCG GGATGTGGAG 
CGCATGGTGG AGGCACGCCT GGCACACCAG GTCCTGGTAC GCTCCGTGGA CTTCGTGTCG 
TCTGCACACG TCAGCCACCT CCGCGACTAC CCTACTTATT ACACTACCCT CTGCATCAAC 
TTCATGCACA GCTGTGTCCA CTGCTCAGGT CCTTGCCCTC CCCACCTCAC TTCTGCTCCA 
GAAATAAATG CCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_024845415.1
CDS101..1015
Translation

Target ORF information:

RefSeq Version XM_024989647.1
Organism Bos taurus(cattle)
Definition Bos taurus transmembrane protein 53 (TMEM53), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_024989647.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCTTCAG CCCAGCTGGA CTACACCATC GAGATCCCTG ATCAGCCCTG CCGGAGTCAG 
GGTATGGAAC GAGGGTTGGG TCCAGTCGTG GAGAACAGCC CTGACCAAGG TGGGAAGGAG 
GCTGGGACTC GACTGCCTTT GGTGATTCTC TTGGGCTGGG GAGGCTGCTC TGACAAGAAC 
CTGGCCAAGT ACAGTGCCAT CTATCACAAA AGGGGCTGCA TCGTCATCCG ATACACAGCC 
CCCTGGCACA TGGTCTTCTT CTCCGAGACC CTGGGCATCC CTTCACTTCG TGTCTTGGCC 
CAGAAGCTGC TTGAGCTGCT CTTTGATTAC GAGGTTGAGA AGGAGCCCCT GCTCTTCCAC 
GTCTTCAGCA ACGCTGGCGT CATGCTGTAC CGATATGTGC TGGAGCTCCT GCAGACCCAC 
CAGCGCTTCT GTCACCTGCG TGTGGTGGGC ACCATCTTTG ACAGCGGTCC TGGTGACAGC 
AACCTGCTGG GGGCTCTGCG GGCACTGGCA GTCGTCCTAG AGCACCGTCC TGCCGCGCTG 
CGCCTGCTGC TCCTGGTGGC CTTCACCCTG GTGGCCTTCC TGTTCCACGT CCTGCTCGCG 
CCACTCACTG CCCTCTTCCA CACGCACTTC TATGACAGGC TGCTCGACGC AGCCTCTCGC 
TGGCCCGAGC TCTACCTCTA CTCCAGGGCC GACGAGGTGG TCCTGGCCCG GGATGTGGAG 
CGCATGGTGG AGGCACGCCT GGCACACCAG GTCCTGGTAC GCTCCGTGGA CTTCGTGTCG 
TCTGCACACG TCAGCCACCT CCGCGACTAC CCTACTTATT ACACTACCCT CTGCATCAAC 
TTCATGCACA GCTGTGTCCA CTGCTCAGGT CCTTGCCCTC CCCACCTCAC TTCTGCTCCA 
GAAATAAATG CCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL