Gene Symbol | PSMA6 |
Entrez Gene ID | 452861 |
Full Name | proteasome subunit alpha 6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » PSMA6 cDNA ORF clone
Gene Symbol | PSMA6 |
Entrez Gene ID | 452861 |
Full Name | proteasome subunit alpha 6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016925747.2 | XP_016781236.1 | proteasome subunit alpha type-6 isoform X2 |
XM_016925746.1 | XP_016781235.1 | proteasome subunit alpha type-6 isoform X2 |
XM_016925747.1 | XP_016781236.1 | proteasome subunit alpha type-6 isoform X2 |
XM_024348565.1 | XP_024204333.1 | proteasome subunit alpha type-6 isoform X2 |
XM_016925745.1 | XP_016781234.1 | proteasome subunit alpha type-6 isoform X1 |
NM_001246657.1 | NP_001233586.1 | proteasome subunit alpha type-6 |
Canis lupus familiaris (dog) | PSMA6 | XP_537412.2 |
Saccharomyces cerevisiae (baker's yeast) | SCL1 | NP_011504.3 |
Eremothecium gossypii | AGOS_AGL089W | NP_986577.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_01153 | XP_003717769.1 |
PSMA6 | XP_001095483.1 | |
Mus musculus (house mouse) | Psma6 | NP_036098.1 |
Drosophila melanogaster (fruit fly) | CG30382 | NP_001163078.1 |
Kluyveromyces lactis | KLLA0A05027g | XP_451221.1 |
Oryza sativa (rice) | Os03g0180400 | NP_001049162.1 |
Xenopus tropicalis (tropical clawed frog) | psma6 | NP_989113.1 |
PSMA6 | XP_001086524.1 | |
Gallus gallus (chicken) | PSMA6 | NP_001264372.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003935 | XP_318387.2 |
Arabidopsis thaliana (thale cress) | PAA1 | NP_198409.1 |
Bos taurus (cattle) | PSMA6 | NP_001039427.1 |
Rattus norvegicus (Norway rat) | Psma6 | NP_058979.1 |
Danio rerio (zebrafish) | zgc:92716 | NP_001002589.1 |
Drosophila melanogaster (fruit fly) | Prosalpha1 | NP_524837.2 |
Caenorhabditis elegans (roundworm) | pas-1 | NP_506571.1 |
Schizosaccharomyces pombe (fission yeast) | SPBC646.16 | NP_595374.1 |
Arabidopsis thaliana (thale cress) | PAA2 | NP_178641.1 |
Homo sapiens (human) | PSMA6 | NP_002782.1 |
Pan troglodytes (chimpanzee) | PSMA6 | NP_001233586.1 |
Neurospora crassa | NCU10061 | XP_957907.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PSMA6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PSMA6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc01259 | |
Clone ID Related Accession (Same CDS sequence) | NM_001246657.1 | |
Accession Version | NM_001246657.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 741bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-03 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | proteasome subunit alpha type-6 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK306691.1. On or before Oct 10, 2011 this sequence version replaced XM_001140243.2, XM_001140072.2. ##Evidence-Data-START## Transcript exon combination :: AK306691.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCCCGTG GTTCCAGCGC CGGTTTTGAC CGCCACATTA CCATTTTTTC ACCCGAGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001233586.1 |
CDS | 30..770 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001246657.1 |
1 | ATGTCCCGTG GTTCCAGCGC CGGTTTTGAC CGCCACATTA CCATTTTTTC ACCCGAGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc31590 | |
Clone ID Related Accession (Same CDS sequence) | XM_016925747.2 , XM_016925746.1 , XM_016925747.1 , XM_024348565.1 | |
Accession Version | XM_016925747.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 504bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | proteasome subunit alpha type-6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016925747.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCGGAA TGACAGCTGA CAGCAGATCC CAGGTACAGA GGGCACGCTA TGAGGCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016781236.1 |
CDS | 300..803 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016925747.2 |
1 | ATGACCGGAA TGACAGCTGA CAGCAGATCC CAGGTACAGA GGGCACGCTA TGAGGCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc31590 | |
Clone ID Related Accession (Same CDS sequence) | XM_016925747.2 , XM_016925746.1 , XM_016925747.1 , XM_024348565.1 | |
Accession Version | XM_016925746.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 504bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | proteasome subunit alpha type-6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006481.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCGGAA TGACAGCTGA CAGCAGATCC CAGGTACAGA GGGCACGCTA TGAGGCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016781235.1 |
CDS | 480..983 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016925746.1 |
1 | ATGACCGGAA TGACAGCTGA CAGCAGATCC CAGGTACAGA GGGCACGCTA TGAGGCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc31590 | |
Clone ID Related Accession (Same CDS sequence) | XM_016925747.2 , XM_016925746.1 , XM_016925747.1 , XM_024348565.1 | |
Accession Version | XM_016925747.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 504bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | proteasome subunit alpha type-6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006481.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCGGAA TGACAGCTGA CAGCAGATCC CAGGTACAGA GGGCACGCTA TGAGGCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016781236.1 |
CDS | 363..866 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016925747.1 |
1 | ATGACCGGAA TGACAGCTGA CAGCAGATCC CAGGTACAGA GGGCACGCTA TGAGGCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc31590 | |
Clone ID Related Accession (Same CDS sequence) | XM_016925747.2 , XM_016925746.1 , XM_016925747.1 , XM_024348565.1 | |
Accession Version | XM_024348565.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 504bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | proteasome subunit alpha type-6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCGGAA TGACAGCTGA CAGCAGATCC CAGGTACAGA GGGCACGCTA TGAGGCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024204333.1 |
CDS | 216..719 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024348565.1 |
1 | ATGACCGGAA TGACAGCTGA CAGCAGATCC CAGGTACAGA GGGCACGCTA TGAGGCAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc67721 | |
Clone ID Related Accession (Same CDS sequence) | XM_016925745.1 | |
Accession Version | XM_016925745.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 684bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | proteasome subunit alpha type-6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGGTC TTCGGAGAGA ATATGCTTTT AAGGCTATTA ACCAGGGTGG CCTTACATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016781234.1 |
CDS | 138..821 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016925745.1 |
1 | ATGGCAGGTC TTCGGAGAGA ATATGCTTTT AAGGCTATTA ACCAGGGTGG CCTTACATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |