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FARSB cDNA ORF clone, Pan troglodytes(chimpanzee)

Summary

Gene Symbol FARSB
Entrez Gene ID 470661
Full Name phenylalanyl-tRNA synthetase beta subunit
Synonyms FARSLB
General protein information
Preferred Names

phenylalanyl-tRNA synthetase beta subunit

Names

phenylalanine--tRNA ligase beta subunit
phenylalanine-tRNA synthetase-like, beta subunit
phenylalanyl-tRNA synthetase beta chain
Gene Type protein-coding
Organism Pan troglodytes(chimpanzee)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_016949364.1 XP_016804853.1 phenylalanine--tRNA ligase beta subunit isoform X1
NM_001246538.1 NP_001233467.1 phenylalanine--tRNA ligase beta subunit
XM_016949363.1 XP_016804852.1 phenylalanine--tRNA ligase beta subunit isoform X1

Pathways from BioSystems


Homologies


Danio rerio (zebrafish) farsb NP_001007769.1
FARSB XP_002808073.1
Drosophila melanogaster (fruit fly) CG5706 NP_651237.1
Arabidopsis thaliana (thale cress) AT1G72550 NP_177399.1
Oryza sativa (rice) Os05g0558900 NP_001056297.1
Canis lupus familiaris (dog) FARSB XP_536085.2
Pan troglodytes (chimpanzee) FARSB NP_001233467.1
Gallus gallus (chicken) FARSB NP_001006543.1
Caenorhabditis elegans (roundworm) fars-3 NP_495785.1
Saccharomyces cerevisiae (baker's yeast) FRS1 NP_013161.1
Kluyveromyces lactis KLLA0D05137g XP_453289.1
Eremothecium gossypii AGOS_ACR219W NP_983621.2
Schizosaccharomyces pombe (fission yeast) frs1 NP_594442.1
Homo sapiens (human) FARSB NP_005678.3
Bos taurus (cattle) FARSB NP_001098491.1
Mus musculus (house mouse) Farsb NP_001265004.1
Rattus norvegicus (Norway rat) Farsb NP_001004252.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP003517 XP_003436507.1
Magnaporthe oryzae (rice blast fungus) MGG_00876 XP_003718093.1
Neurospora crassa NCU08888 XP_958826.2
Xenopus tropicalis (tropical clawed frog) farsb NP_001015711.1

Gene Ontology


Bibliography

Related articles in PubMed

Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following FARSB gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the FARSB cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPc01037 NM_001246538.1
Latest version!		 Pan troglodytes phenylalanyl-tRNA synthetase subunit beta (FARSB), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
OPc79756 XM_016949364.1
Latest version!		 Pan troglodytes phenylalanyl-tRNA synthetase beta subunit (FARSB), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $258.30
$369.00
OPc79756 XM_016949363.1
Latest version!		 Pan troglodytes phenylalanyl-tRNA synthetase beta subunit (FARSB), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $258.30
$369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OPc01037
Clone ID Related Accession (Same CDS sequence) NM_001246538.1
Accession Version NM_001246538.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1770bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-04-25
Organism Pan troglodytes(chimpanzee)
Product phenylalanine--tRNA ligase beta subunit
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK304947.1. On Oct 11, 2011 this sequence version replaced XM_526043.2. ##Evidence-Data-START## Transcript exon combination :: AK304947.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01120800, SAMN01120804 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGCCGACTG TCAGCGTGAA GCGTGATCTG CTCTTCCAAG CCCTGGGCCG CACCTACACT 
GACGAAGAAT TTGATGAACT ATGTTTTGAA TTTGGTCTGG AGCTTGATGA AATTACATCT 
GAGAAGGAAA TAATAAGTAA AGAACAAGGT AATGTAAAGG CAGCAGGAGC CTCTGATGTT 
GTTCTTTACA AAATTGACGT CCCTGCCAAT AGATATGATC TCCTGTGTCT GGAAGGATTG 
GTTCGAGGAC TTCAGGTCTT CAAAGAAAGG ATAAAGGCTC CAGTGTATAA ACGGGTAATG 
CCTGATGGAA AAATCCAGAA ATTGATTATC ACAGAAGAGA CAGCTAAGAT ACGTCCTTTT 
GCGGTAGCAG CAGTTCTCCG TAATATAAAG TTTACTAAAG ATCGATATGA CAGCTTCATT 
GAACTTCAGG AGAAATTACA TCAGAATATT TGCAGGAAAA GAGCACTGGT TGCCATTGGT 
ACCCATGATT TGGACACTTT GTCGGGCCCA TTTACTTATA CTGCAAAGCG TCCTTCAGAT 
ATCAAATTCA AGCCTCTAAA TAAGACCAAG GAGTATACAG CCTGTGAACT GATGAACATA 
TACAAGACTG ACAGTCACCT GAAACATTAT TTACATATCA TTGAAAACAA ACCCCTGTAT 
CCAGTTATCT ATGATAGCAA TGGTGTCGTC CTTTCAATGC CTCCCATCAT CAATGGGGAT 
CATTCCAAAA TAACAGTAAA TACTAGAAAT ATTTTTATTG AATGCACGGG AACTGACTTT 
ACTAAGGCAA AAATAGTTCT TGATATTATT GTCACCATGT TCAGTGAATA TTGTGAGAAT 
CAATTTACGG TCGAAGCTGC TGAAGTGGTT TTTCCTAATG GAAAATCACA TACCTTTCCA 
GAATTAGCTT ACCGAAAGGA GATGGTGAGA GCTGACCTAA TTAACAAGAA AGTTGGAATC 
AGAGAAACTC CAGAAAATCT TGCCAAACTT CTGACCAGGA TGTATTTAAA ATCAGAAGTC 
ATAGGTGATG GGAATCAGAT TGAGATTGAA ATCCCTCCAA CCAGAGCTGA CATTATCCAT 
GCATGTGATA TTGTAGAAGA TGCAGCTATT GCTTATGGAT ATAACAACAT TCAGATGACT 
CTCCCGAAAA CTTACACCAT AGCTAATCAA TTTCCTCTTA ATAAGCTCAC TGAACTTCTC 
AGACATGACA TGGCAGCCGC TGGCTTCACT GAAGCACTTA CCTTTGCCCT GTGCTCCCAA 
GAAGATATTG CTGATAAACT TGGTGTGGAT ATCTCTGCAA CAAAGGCAGT CCACATAAGT 
AATCCTAAAA CAGCTGAATT TCAGGTGGCA CGCACTACCC TTCTTCCTGG CCTCCTGAAG 
ACCATAGCAG CAAATCGTAA GATGCCCCTT CCACTGAAAC TGTTTGAAAT CTCTGACATT 
GTAATAAAAG ATTCTAATAC AGATGTAGGT GCAAAAAACT ACAGACATCT CTGTGCTGTT 
TATTACAACA AGAATCCTGG GTTTGAGATT ATTCATGGGC TGCTGGACAG AATTATGCAG 
TTGCTCGATG TGCCTCCTGG TGAAGACAAG GGGGGATATG TGATCAAAGC ATCAGAAGGG 
CCTGCTTTCT TCCCCGGGCG ATGTGCAGAG ATCTTTGCCA GGGGTCAAAG CGTCGGGAAG 
CTTGGGGTCC TTCATCCTGA CGTTATCACC AAATTTGAGC TGACCATGCC CTGCTCCTCC 
CTAGAAATCA ATATTGGACC CTTTTTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001233467.1
CDS24..1793
Translation

Target ORF information:

RefSeq Version NM_001246538.1
Organism Pan troglodytes(chimpanzee)
Definition Pan troglodytes phenylalanyl-tRNA synthetase subunit beta (FARSB), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001246538.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
ATGCCGACTG TCAGCGTGAA GCGTGATCTG CTCTTCCAAG CCCTGGGCCG CACCTACACT 
GACGAAGAAT TTGATGAACT ATGTTTTGAA TTTGGTCTGG AGCTTGATGA AATTACATCT 
GAGAAGGAAA TAATAAGTAA AGAACAAGGT AATGTAAAGG CAGCAGGAGC CTCTGATGTT 
GTTCTTTACA AAATTGACGT CCCTGCCAAT AGATATGATC TCCTGTGTCT GGAAGGATTG 
GTTCGAGGAC TTCAGGTCTT CAAAGAAAGG ATAAAGGCTC CAGTGTATAA ACGGGTAATG 
CCTGATGGAA AAATCCAGAA ATTGATTATC ACAGAAGAGA CAGCTAAGAT ACGTCCTTTT 
GCGGTAGCAG CAGTTCTCCG TAATATAAAG TTTACTAAAG ATCGATATGA CAGCTTCATT 
GAACTTCAGG AGAAATTACA TCAGAATATT TGCAGGAAAA GAGCACTGGT TGCCATTGGT 
ACCCATGATT TGGACACTTT GTCGGGCCCA TTTACTTATA CTGCAAAGCG TCCTTCAGAT 
ATCAAATTCA AGCCTCTAAA TAAGACCAAG GAGTATACAG CCTGTGAACT GATGAACATA 
TACAAGACTG ACAGTCACCT GAAACATTAT TTACATATCA TTGAAAACAA ACCCCTGTAT 
CCAGTTATCT ATGATAGCAA TGGTGTCGTC CTTTCAATGC CTCCCATCAT CAATGGGGAT 
CATTCCAAAA TAACAGTAAA TACTAGAAAT ATTTTTATTG AATGCACGGG AACTGACTTT 
ACTAAGGCAA AAATAGTTCT TGATATTATT GTCACCATGT TCAGTGAATA TTGTGAGAAT 
CAATTTACGG TCGAAGCTGC TGAAGTGGTT TTTCCTAATG GAAAATCACA TACCTTTCCA 
GAATTAGCTT ACCGAAAGGA GATGGTGAGA GCTGACCTAA TTAACAAGAA AGTTGGAATC 
AGAGAAACTC CAGAAAATCT TGCCAAACTT CTGACCAGGA TGTATTTAAA ATCAGAAGTC 
ATAGGTGATG GGAATCAGAT TGAGATTGAA ATCCCTCCAA CCAGAGCTGA CATTATCCAT 
GCATGTGATA TTGTAGAAGA TGCAGCTATT GCTTATGGAT ATAACAACAT TCAGATGACT 
CTCCCGAAAA CTTACACCAT AGCTAATCAA TTTCCTCTTA ATAAGCTCAC TGAACTTCTC 
AGACATGACA TGGCAGCCGC TGGCTTCACT GAAGCACTTA CCTTTGCCCT GTGCTCCCAA 
GAAGATATTG CTGATAAACT TGGTGTGGAT ATCTCTGCAA CAAAGGCAGT CCACATAAGT 
AATCCTAAAA CAGCTGAATT TCAGGTGGCA CGCACTACCC TTCTTCCTGG CCTCCTGAAG 
ACCATAGCAG CAAATCGTAA GATGCCCCTT CCACTGAAAC TGTTTGAAAT CTCTGACATT 
GTAATAAAAG ATTCTAATAC AGATGTAGGT GCAAAAAACT ACAGACATCT CTGTGCTGTT 
TATTACAACA AGAATCCTGG GTTTGAGATT ATTCATGGGC TGCTGGACAG AATTATGCAG 
TTGCTCGATG TGCCTCCTGG TGAAGACAAG GGGGGATATG TGATCAAAGC ATCAGAAGGG 
CCTGCTTTCT TCCCCGGGCG ATGTGCAGAG ATCTTTGCCA GGGGTCAAAG CGTCGGGAAG 
CTTGGGGTCC TTCATCCTGA CGTTATCACC AAATTTGAGC TGACCATGCC CTGCTCCTCC 
CTAGAAATCA ATATTGGACC CTTTTTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OPc79756
Clone ID Related Accession (Same CDS sequence) XM_016949364.1 , XM_016949363.1
Accession Version XM_016949364.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1473bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-03-19
Organism Pan troglodytes(chimpanzee)
Product phenylalanine--tRNA ligase beta subunit isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036881.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCCTGATG GAAAAATCCA GAAATTGATT ATCACAGAAG AGACAGCTAA GATACGTCCT 
TTTGCGGTAG CAGCAGTTCT CCGTAATATA AAGTTTACTA AAGATCGATA TGACAGCTTC 
ATTGAACTTC AGGAGAAATT ACATCAGAAT ATTTGCAGGA AAAGAGCACT GGTTGCCATT 
GGTACCCATG ATTTGGACAC TTTGTCGGGC CCATTTACTT ATACTGCAAA GCGTCCTTCA 
GATATCAAAT TCAAGCCTCT AAATAAGACC AAGGAGTATA CAGCCTGTGA ACTGATGAAC 
ATATACAAGA CTGACAGTCA CCTGAAACAT TATTTACATA TCATTGAAAA CAAACCCCTG 
TATCCAGTTA TCTATGATAG CAATGGTGTC GTCCTTTCAA TGCCTCCCAT CATCAATGGG 
GATCATTCCA AAATAACAGT AAATACTAGA AATATTTTTA TTGAATGCAC GGGAACTGAC 
TTTACTAAGG CAAAAATAGT TCTTGATATT ATTGTCACCA TGTTCAGTGA ATATTGTGAG 
AATCAATTTA CGGTCGAAGC TGCTGAAGTG GTTTTTCCTA ATGGAAAATC ACATACCTTT 
CCAGAATTAG CTTACCGAAA GGAGATGGTG AGAGCTGACC TAATTAACAA GAAAGTTGGA 
ATCAGAGAAA CTCCAGAAAA TCTTGCCAAA CTTCTGACCA GGATGTATTT AAAATCAGAA 
GTCATAGGTG ATGGGAATCA GATTGAGATT GAAATCCCTC CAACCAGAGC TGACATTATC 
CATGCATGTG ATATTGTAGA AGATGCAGCT ATTGCTTATG GATATAACAA CATTCAGATG 
ACTCTCCCGA AAACTTACAC CATAGCTAAT CAATTTCCTC TTAATAAGCT CACTGAACTT 
CTCAGACATG ACATGGCAGC CGCTGGCTTC ACTGAAGCAC TTACCTTTGC CCTGTGCTCC 
CAAGAAGATA TTGCTGATAA ACTTGGTGTG GATATCTCTG CAACAAAGGC AGTCCACATA 
AGTAATCCTA AAACAGCTGA ATTTCAGGTG GCACGCACTA CCCTTCTTCC TGGCCTCCTG 
AAGACCATAG CAGCAAATCG TAAGATGCCC CTTCCACTGA AACTGTTTGA AATCTCTGAC 
ATTGTAATAA AAGATTCTAA TACAGATGTA GGTGCAAAAA ACTACAGACA TCTCTGTGCT 
GTTTATTACA ACAAGAATCC TGGGTTTGAG ATTATTCATG GGCTGCTGGA CAGAATTATG 
CAGTTGCTCG ATGTGCCTCC TGGTGAAGAC AAGGGGGGAT ATGTGATCAA AGCATCAGAA 
GGGCCTGCTT TCTTCCCCGG GCGATGTGCA GAGATCTTTG CCAGGGGTCA AAGCGTCGGG 
AAGCTTGGGG TCCTTCATCC TGACGTTATC ACCAAATTTG AGCTGACCAT GCCCTGCTCC 
TCCCTAGAAA TCAATATTGG ACCCTTTTTG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_016804853.1
CDS836..2308
Translation

Target ORF information:

RefSeq Version XM_016949364.1
Organism Pan troglodytes(chimpanzee)
Definition Pan troglodytes phenylalanyl-tRNA synthetase beta subunit (FARSB), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_016949364.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCCTGATG GAAAAATCCA GAAATTGATT ATCACAGAAG AGACAGCTAA GATACGTCCT 
TTTGCGGTAG CAGCAGTTCT CCGTAATATA AAGTTTACTA AAGATCGATA TGACAGCTTC 
ATTGAACTTC AGGAGAAATT ACATCAGAAT ATTTGCAGGA AAAGAGCACT GGTTGCCATT 
GGTACCCATG ATTTGGACAC TTTGTCGGGC CCATTTACTT ATACTGCAAA GCGTCCTTCA 
GATATCAAAT TCAAGCCTCT AAATAAGACC AAGGAGTATA CAGCCTGTGA ACTGATGAAC 
ATATACAAGA CTGACAGTCA CCTGAAACAT TATTTACATA TCATTGAAAA CAAACCCCTG 
TATCCAGTTA TCTATGATAG CAATGGTGTC GTCCTTTCAA TGCCTCCCAT CATCAATGGG 
GATCATTCCA AAATAACAGT AAATACTAGA AATATTTTTA TTGAATGCAC GGGAACTGAC 
TTTACTAAGG CAAAAATAGT TCTTGATATT ATTGTCACCA TGTTCAGTGA ATATTGTGAG 
AATCAATTTA CGGTCGAAGC TGCTGAAGTG GTTTTTCCTA ATGGAAAATC ACATACCTTT 
CCAGAATTAG CTTACCGAAA GGAGATGGTG AGAGCTGACC TAATTAACAA GAAAGTTGGA 
ATCAGAGAAA CTCCAGAAAA TCTTGCCAAA CTTCTGACCA GGATGTATTT AAAATCAGAA 
GTCATAGGTG ATGGGAATCA GATTGAGATT GAAATCCCTC CAACCAGAGC TGACATTATC 
CATGCATGTG ATATTGTAGA AGATGCAGCT ATTGCTTATG GATATAACAA CATTCAGATG 
ACTCTCCCGA AAACTTACAC CATAGCTAAT CAATTTCCTC TTAATAAGCT CACTGAACTT 
CTCAGACATG ACATGGCAGC CGCTGGCTTC ACTGAAGCAC TTACCTTTGC CCTGTGCTCC 
CAAGAAGATA TTGCTGATAA ACTTGGTGTG GATATCTCTG CAACAAAGGC AGTCCACATA 
AGTAATCCTA AAACAGCTGA ATTTCAGGTG GCACGCACTA CCCTTCTTCC TGGCCTCCTG 
AAGACCATAG CAGCAAATCG TAAGATGCCC CTTCCACTGA AACTGTTTGA AATCTCTGAC 
ATTGTAATAA AAGATTCTAA TACAGATGTA GGTGCAAAAA ACTACAGACA TCTCTGTGCT 
GTTTATTACA ACAAGAATCC TGGGTTTGAG ATTATTCATG GGCTGCTGGA CAGAATTATG 
CAGTTGCTCG ATGTGCCTCC TGGTGAAGAC AAGGGGGGAT ATGTGATCAA AGCATCAGAA 
GGGCCTGCTT TCTTCCCCGG GCGATGTGCA GAGATCTTTG CCAGGGGTCA AAGCGTCGGG 
AAGCTTGGGG TCCTTCATCC TGACGTTATC ACCAAATTTG AGCTGACCAT GCCCTGCTCC 
TCCCTAGAAA TCAATATTGG ACCCTTTTTG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OPc79756
Clone ID Related Accession (Same CDS sequence) XM_016949364.1 , XM_016949363.1
Accession Version XM_016949363.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1473bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-03-19
Organism Pan troglodytes(chimpanzee)
Product phenylalanine--tRNA ligase beta subunit isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036881.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCCTGATG GAAAAATCCA GAAATTGATT ATCACAGAAG AGACAGCTAA GATACGTCCT 
TTTGCGGTAG CAGCAGTTCT CCGTAATATA AAGTTTACTA AAGATCGATA TGACAGCTTC 
ATTGAACTTC AGGAGAAATT ACATCAGAAT ATTTGCAGGA AAAGAGCACT GGTTGCCATT 
GGTACCCATG ATTTGGACAC TTTGTCGGGC CCATTTACTT ATACTGCAAA GCGTCCTTCA 
GATATCAAAT TCAAGCCTCT AAATAAGACC AAGGAGTATA CAGCCTGTGA ACTGATGAAC 
ATATACAAGA CTGACAGTCA CCTGAAACAT TATTTACATA TCATTGAAAA CAAACCCCTG 
TATCCAGTTA TCTATGATAG CAATGGTGTC GTCCTTTCAA TGCCTCCCAT CATCAATGGG 
GATCATTCCA AAATAACAGT AAATACTAGA AATATTTTTA TTGAATGCAC GGGAACTGAC 
TTTACTAAGG CAAAAATAGT TCTTGATATT ATTGTCACCA TGTTCAGTGA ATATTGTGAG 
AATCAATTTA CGGTCGAAGC TGCTGAAGTG GTTTTTCCTA ATGGAAAATC ACATACCTTT 
CCAGAATTAG CTTACCGAAA GGAGATGGTG AGAGCTGACC TAATTAACAA GAAAGTTGGA 
ATCAGAGAAA CTCCAGAAAA TCTTGCCAAA CTTCTGACCA GGATGTATTT AAAATCAGAA 
GTCATAGGTG ATGGGAATCA GATTGAGATT GAAATCCCTC CAACCAGAGC TGACATTATC 
CATGCATGTG ATATTGTAGA AGATGCAGCT ATTGCTTATG GATATAACAA CATTCAGATG 
ACTCTCCCGA AAACTTACAC CATAGCTAAT CAATTTCCTC TTAATAAGCT CACTGAACTT 
CTCAGACATG ACATGGCAGC CGCTGGCTTC ACTGAAGCAC TTACCTTTGC CCTGTGCTCC 
CAAGAAGATA TTGCTGATAA ACTTGGTGTG GATATCTCTG CAACAAAGGC AGTCCACATA 
AGTAATCCTA AAACAGCTGA ATTTCAGGTG GCACGCACTA CCCTTCTTCC TGGCCTCCTG 
AAGACCATAG CAGCAAATCG TAAGATGCCC CTTCCACTGA AACTGTTTGA AATCTCTGAC 
ATTGTAATAA AAGATTCTAA TACAGATGTA GGTGCAAAAA ACTACAGACA TCTCTGTGCT 
GTTTATTACA ACAAGAATCC TGGGTTTGAG ATTATTCATG GGCTGCTGGA CAGAATTATG 
CAGTTGCTCG ATGTGCCTCC TGGTGAAGAC AAGGGGGGAT ATGTGATCAA AGCATCAGAA 
GGGCCTGCTT TCTTCCCCGG GCGATGTGCA GAGATCTTTG CCAGGGGTCA AAGCGTCGGG 
AAGCTTGGGG TCCTTCATCC TGACGTTATC ACCAAATTTG AGCTGACCAT GCCCTGCTCC 
TCCCTAGAAA TCAATATTGG ACCCTTTTTG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_016804852.1
CDS771..2243
Translation

Target ORF information:

RefSeq Version XM_016949363.1
Organism Pan troglodytes(chimpanzee)
Definition Pan troglodytes phenylalanyl-tRNA synthetase beta subunit (FARSB), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_016949363.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
ATGCCTGATG GAAAAATCCA GAAATTGATT ATCACAGAAG AGACAGCTAA GATACGTCCT 
TTTGCGGTAG CAGCAGTTCT CCGTAATATA AAGTTTACTA AAGATCGATA TGACAGCTTC 
ATTGAACTTC AGGAGAAATT ACATCAGAAT ATTTGCAGGA AAAGAGCACT GGTTGCCATT 
GGTACCCATG ATTTGGACAC TTTGTCGGGC CCATTTACTT ATACTGCAAA GCGTCCTTCA 
GATATCAAAT TCAAGCCTCT AAATAAGACC AAGGAGTATA CAGCCTGTGA ACTGATGAAC 
ATATACAAGA CTGACAGTCA CCTGAAACAT TATTTACATA TCATTGAAAA CAAACCCCTG 
TATCCAGTTA TCTATGATAG CAATGGTGTC GTCCTTTCAA TGCCTCCCAT CATCAATGGG 
GATCATTCCA AAATAACAGT AAATACTAGA AATATTTTTA TTGAATGCAC GGGAACTGAC 
TTTACTAAGG CAAAAATAGT TCTTGATATT ATTGTCACCA TGTTCAGTGA ATATTGTGAG 
AATCAATTTA CGGTCGAAGC TGCTGAAGTG GTTTTTCCTA ATGGAAAATC ACATACCTTT 
CCAGAATTAG CTTACCGAAA GGAGATGGTG AGAGCTGACC TAATTAACAA GAAAGTTGGA 
ATCAGAGAAA CTCCAGAAAA TCTTGCCAAA CTTCTGACCA GGATGTATTT AAAATCAGAA 
GTCATAGGTG ATGGGAATCA GATTGAGATT GAAATCCCTC CAACCAGAGC TGACATTATC 
CATGCATGTG ATATTGTAGA AGATGCAGCT ATTGCTTATG GATATAACAA CATTCAGATG 
ACTCTCCCGA AAACTTACAC CATAGCTAAT CAATTTCCTC TTAATAAGCT CACTGAACTT 
CTCAGACATG ACATGGCAGC CGCTGGCTTC ACTGAAGCAC TTACCTTTGC CCTGTGCTCC 
CAAGAAGATA TTGCTGATAA ACTTGGTGTG GATATCTCTG CAACAAAGGC AGTCCACATA 
AGTAATCCTA AAACAGCTGA ATTTCAGGTG GCACGCACTA CCCTTCTTCC TGGCCTCCTG 
AAGACCATAG CAGCAAATCG TAAGATGCCC CTTCCACTGA AACTGTTTGA AATCTCTGAC 
ATTGTAATAA AAGATTCTAA TACAGATGTA GGTGCAAAAA ACTACAGACA TCTCTGTGCT 
GTTTATTACA ACAAGAATCC TGGGTTTGAG ATTATTCATG GGCTGCTGGA CAGAATTATG 
CAGTTGCTCG ATGTGCCTCC TGGTGAAGAC AAGGGGGGAT ATGTGATCAA AGCATCAGAA 
GGGCCTGCTT TCTTCCCCGG GCGATGTGCA GAGATCTTTG CCAGGGGTCA AAGCGTCGGG 
AAGCTTGGGG TCCTTCATCC TGACGTTATC ACCAAATTTG AGCTGACCAT GCCCTGCTCC 
TCCCTAGAAA TCAATATTGG ACCCTTTTTG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Major chimpanzee-specific structural changes in sperm development-associated genes.
Functional & integrative genomics11(3)507-17(2011 Sep)
Kim RN,Kim DW,Choi SH,Chae SH,Nam SH,Kim DW,Kim A,Kang A,Park KH,Lee YS,Hirai M,Suzuki Y,Sugano S,Hashimoto K,Kim DS,Park HS