Gene Symbol |
HSP90AA1 |
Entrez Gene ID |
743883 |
Full Name |
heat shock protein 90 alpha family class A member 1 |
General protein information |
- Preferred Names
heat shock protein 90 alpha family class A member 1
Names
heat shock protein HSP 90-alpha heat shock protein 90kDa alpha (cytosolic), class A member 1 heat shock protein 90kDa alpha, class A member 1
|
Gene Type |
protein-coding |
Organism |
Pan troglodytes(chimpanzee) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_016925810.2 |
XP_016781299.2 |
heat shock protein HSP 90-alpha isoform X1 |
NM_001098572.1 |
NP_001092042.1 |
heat shock protein HSP 90-alpha |
XM_016925810.1 |
XP_016781299.1 |
heat shock protein HSP 90-alpha isoform X1 |
Canis lupus familiaris (dog) |
HSP90AA1 |
XP_005623992.1 |
Arabidopsis thaliana (thale cress) |
HSP81-3 |
NP_200412.1 |
Arabidopsis thaliana (thale cress) |
HSP81-2 |
NP_200414.1 |
Oryza sativa (rice) |
Os09g0482100 |
NP_001063500.1 |
|
HSP90AA1 |
XP_002805263.1 |
Arabidopsis thaliana (thale cress) |
Hsp81.4 |
NP_200411.1 |
Oryza sativa (rice) |
Os09g0482400 |
NP_001063503.1 |
Pan troglodytes (chimpanzee) |
HSP90AA1 |
NP_001092042.1 |
Mus musculus (house mouse) |
Hsp90aa1 |
NP_034610.1 |
Rattus norvegicus (Norway rat) |
Hsp90aa1 |
NP_786937.1 |
Bos taurus (cattle) |
HSP90AA1 |
NP_001012688.1 |
Gallus gallus (chicken) |
HSP90AA1 |
NP_001103255.1 |
Oryza sativa (rice) |
Os09g0482610 |
NP_001175894.1 |
Homo sapiens (human) |
HSP90AA1 |
NP_001017963.2 |
Danio rerio (zebrafish) |
hsp90aa1.2 |
NP_001038538.1 |
Danio rerio (zebrafish) |
hsp90aa1.1 |
NP_571403.1 |
Xenopus tropicalis (tropical clawed frog) |
hsp90aa1.1 |
NP_001016282.1 |
Related articles in PubMed
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome.
Sakate R, Suto Y, Imanishi T, Tanoue T, Hida M, Hayasaka I, Kusuda J, Gojobori T, Hashimoto K, Hirai M
Gene399(1)1-10(2007 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HSP90AA1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HSP90AA1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OPc97222 |
Clone ID Related Accession (Same CDS sequence) |
XM_016925810.2
|
Accession Version |
XM_016925810.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2202bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
heat shock protein HSP 90-alpha isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036893.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 20, 2018 this sequence version replaced XM_016925810.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161
| ATGCCTGAGG AAACCCAGAC CCAAGACCAA CCGATGGAGG AGGAGGAGGT TGAGACTTTC GCCTTTCAGG CAGAAATTGC CCAGTTGATG TCATTGATCA TCAATACTTT CTACTCGAAC AAAGAGATCT TTCTGAGAGA GCTCATTTCA AATTCATCAG ATGCGTTGGA CAAAATCCGG TATGAAAGCT TGACAGATCC CAGTAAATTA GACTCTGGGA AAGAGCTGCA TATTAACCTT ATACCGAACA AACAAGATCG AACCCTCACT ATTGTGGATA CTGGAATTGG AATGACCAAG GCTGACTTGA TCAATAACCT TGGTACTATC GCCAAGTCTG GGACCAAAGC GTTCATGGAA GCTTTGCAGG CTGGTGCAGA TATCTCTATG ATTGGCCAGT TCGGTGTTGG TTTTTATTCT GCTTATTTGG TTGCTGAGAA AGTAACTGTG ATCACCAAAC ATAATGATGA TGAGCAGTAC GCTTGGGAGT CCTCAGCAGG GGGATCATTC ACAGTGAGGA CAGACACAGG TGAACCTATG GGTCGTGGAA CAAAAGTTAT CCTACACCTG AAAGAAGACC AAACTGAGTA CTTGGAGGAA CGAAGAATAA AGGAGATTGT GAAGAAACAT TCTCAGTTTA TTGGATATCC CATTACTCTT TTTGTGGAGA AGGAACGTGA TAAAGAAGTC AGCGATGATG AGGCTGAAGA AAAGGAAGAC AAAGAAGAAG AAAAAGAAAA AGAAGAGAAA GAGTCGGAAG ACAAACCTGA AATTGAAGAT GTTGGTTCTG ATGAGGAAGA AGAAGAAAAG AAGGATGGTG ACAAGAAGAA GAAGAAGAAG ATTAAGGAAA AGTACATCGA TCAAGAAGAG CTCAACAAAA CAAAGCCCAT CTGGACCAGA AATCCCGACG ATATTACTAA TGAGGAGTAC GGAGAATTCT ATAAGAGCTT GACCAATGAC TGGGAAGATC ACTTGGCAGT GAAGCATTTT TCAGTTGAAG GACAGTTGGA ATTCAGAGCC CTTCTATTTG TCCCACGACG TGCTCCTTTT GATCTGTTTG AAAACAGAAA GAAAAAGAAC AACATCAAAT TGTATGTACG CAGAGTTTTC ATCATGGATA ACTGTGAGGA GCTAATCCCT GAGTATCTGA ACTTCATTAG AGGGGTGGTA GACTCGGAGG ACCTCCCTCT AAACATTTCC CGTGAGATGT TGCAACAAAG CAAAATTTTG AAAGTTATCA GGAAGAATTT GGTCAAAAAA TGCTTAGAAC TTTTTACTGA ACTGGCAGAA GATAAAGAGA ACTACAAGAA ATTCTATGAG CAGTTCTCTA AAAACATAAA GCTTGGAATA CACGAAGACT CTCAAAATCG GAAGAAGCTT TCAGAGCTGT TAAGGTACTA CACATCTGCC TCTGGTGATG AGATGGTTTC TCTCAAGGAC TACTGCACCA GAATGAAGGA GAACCAGAAA CATATCTATT ATATCACAGG TGAGACCAAG GACCAGGTAG CTAACTCAGC CTTTGTGGAA CGTCTTCGGA AACACGGCTT AGAAGTGATC TATATGATTG AGCCCATTGA TGAGTACTGT GTCCAACAGC TGAAGGAATT TGAGGGGAAG ACTTTAGTGT CAGTCACCAA AGAAGGCCTG GAACTTCCAG AGGATGAAGA AGAGAAAAAG AAACAGGAAG AGAAAAAAAC AAAGTTTGAG AACCTCTGCA AAATCATGAA AGACATACTG GAGAAAAAAG TTGAAAAGGT GGTTGTGTCA AACCGATTGG TGACATCTCC ATGCTGTATT GTCACAAGCA CATATGGCTG GACAGCAAAC ATGGAGAGAA TCATGAAAGC TCAAGCCCTA AGAGACAACT CAACAATGGG TTACATGGCA GCAAAGAAAC ACCTGGAGAT AAACCCTGAC CATTCCATTA TTGAGACCTT AAGGCAAAAG GCAGAGGCTG ATAAGAACGA CAAGTCTGTG AAGGATCTGG TCATCTTGCT TTATGAAACT GCGCTCCTGT CTTCTGGCTT CAGTCTGGAA GATCCCCAGA CACATGCTAA CAGGATCTAC AGGATGATCA AACTTGGTCT GGGTATTGAT GAAGATGACC CTACTGCTGA TGATACCAGT GCTGCTGTAA CTGAAGAAAT GCCACCCCTT GAAGGAGATG ACGACACATC ACGCATGGAA GAAGTAGACT AA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016781299.2 |
CDS | 174..2375 |
Translation | |
Target ORF information:
RefSeq Version | XM_016925810.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes heat shock protein 90 alpha family class A member 1 (HSP90AA1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016925810.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161
| ATGCCTGAGG AAACCCAGAC CCAAGACCAA CCGATGGAGG AGGAGGAGGT TGAGACTTTC GCCTTTCAGG CAGAAATTGC CCAGTTGATG TCATTGATCA TCAATACTTT CTACTCGAAC AAAGAGATCT TTCTGAGAGA GCTCATTTCA AATTCATCAG ATGCGTTGGA CAAAATCCGG TATGAAAGCT TGACAGATCC CAGTAAATTA GACTCTGGGA AAGAGCTGCA TATTAACCTT ATACCGAACA AACAAGATCG AACCCTCACT ATTGTGGATA CTGGAATTGG AATGACCAAG GCTGACTTGA TCAATAACCT TGGTACTATC GCCAAGTCTG GGACCAAAGC GTTCATGGAA GCTTTGCAGG CTGGTGCAGA TATCTCTATG ATTGGCCAGT TCGGTGTTGG TTTTTATTCT GCTTATTTGG TTGCTGAGAA AGTAACTGTG ATCACCAAAC ATAATGATGA TGAGCAGTAC GCTTGGGAGT CCTCAGCAGG GGGATCATTC ACAGTGAGGA CAGACACAGG TGAACCTATG GGTCGTGGAA CAAAAGTTAT CCTACACCTG AAAGAAGACC AAACTGAGTA CTTGGAGGAA CGAAGAATAA AGGAGATTGT GAAGAAACAT TCTCAGTTTA TTGGATATCC CATTACTCTT TTTGTGGAGA AGGAACGTGA TAAAGAAGTC AGCGATGATG AGGCTGAAGA AAAGGAAGAC AAAGAAGAAG AAAAAGAAAA AGAAGAGAAA GAGTCGGAAG ACAAACCTGA AATTGAAGAT GTTGGTTCTG ATGAGGAAGA AGAAGAAAAG AAGGATGGTG ACAAGAAGAA GAAGAAGAAG ATTAAGGAAA AGTACATCGA TCAAGAAGAG CTCAACAAAA CAAAGCCCAT CTGGACCAGA AATCCCGACG ATATTACTAA TGAGGAGTAC GGAGAATTCT ATAAGAGCTT GACCAATGAC TGGGAAGATC ACTTGGCAGT GAAGCATTTT TCAGTTGAAG GACAGTTGGA ATTCAGAGCC CTTCTATTTG TCCCACGACG TGCTCCTTTT GATCTGTTTG AAAACAGAAA GAAAAAGAAC AACATCAAAT TGTATGTACG CAGAGTTTTC ATCATGGATA ACTGTGAGGA GCTAATCCCT GAGTATCTGA ACTTCATTAG AGGGGTGGTA GACTCGGAGG ACCTCCCTCT AAACATTTCC CGTGAGATGT TGCAACAAAG CAAAATTTTG AAAGTTATCA GGAAGAATTT GGTCAAAAAA TGCTTAGAAC TTTTTACTGA ACTGGCAGAA GATAAAGAGA ACTACAAGAA ATTCTATGAG CAGTTCTCTA AAAACATAAA GCTTGGAATA CACGAAGACT CTCAAAATCG GAAGAAGCTT TCAGAGCTGT TAAGGTACTA CACATCTGCC TCTGGTGATG AGATGGTTTC TCTCAAGGAC TACTGCACCA GAATGAAGGA GAACCAGAAA CATATCTATT ATATCACAGG TGAGACCAAG GACCAGGTAG CTAACTCAGC CTTTGTGGAA CGTCTTCGGA AACACGGCTT AGAAGTGATC TATATGATTG AGCCCATTGA TGAGTACTGT GTCCAACAGC TGAAGGAATT TGAGGGGAAG ACTTTAGTGT CAGTCACCAA AGAAGGCCTG GAACTTCCAG AGGATGAAGA AGAGAAAAAG AAACAGGAAG AGAAAAAAAC AAAGTTTGAG AACCTCTGCA AAATCATGAA AGACATACTG GAGAAAAAAG TTGAAAAGGT GGTTGTGTCA AACCGATTGG TGACATCTCC ATGCTGTATT GTCACAAGCA CATATGGCTG GACAGCAAAC ATGGAGAGAA TCATGAAAGC TCAAGCCCTA AGAGACAACT CAACAATGGG TTACATGGCA GCAAAGAAAC ACCTGGAGAT AAACCCTGAC CATTCCATTA TTGAGACCTT AAGGCAAAAG GCAGAGGCTG ATAAGAACGA CAAGTCTGTG AAGGATCTGG TCATCTTGCT TTATGAAACT GCGCTCCTGT CTTCTGGCTT CAGTCTGGAA GATCCCCAGA CACATGCTAA CAGGATCTAC AGGATGATCA AACTTGGTCT GGGTATTGAT GAAGATGACC CTACTGCTGA TGATACCAGT GCTGCTGTAA CTGAAGAAAT GCCACCCCTT GAAGGAGATG ACGACACATC ACGCATGGAA GAAGTAGACT AA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc00232 |
Clone ID Related Accession (Same CDS sequence) |
NM_001098572.1
|
Accession Version |
NM_001098572.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2202bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-06-07 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
heat shock protein HSP 90-alpha |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB222137.1. On or before Jun 10, 2007 this sequence version replaced XM_001161572.1, XM_001160832.1, XM_001161624.1, XM_001161435.1, XM_001161482.1, XM_001161532.1, XM_001161397.1, XM_001161310.1, XM_001161353.1.
##Evidence-Data-START##
Transcript exon combination :: AB222137.1, AK306249.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN03854168 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161
| ATGCCTGAGG AAACCCAGAC CCAAGACCAA CCGATGGAGG AGGAGGAGGT TGAGACTTTC GCCTTTCAGG CAGAAATTGC CCAGTTGATG TCATTGATCA TCAATACTTT CTACTCGAAC AAAGAGATCT TTCTGAGAGA GCTCATTTCA AATTCATCAG ATGCGTTGGA CAAAATCCGG TATGAAAGCT TGACAGATCC CAGTAAATTA GACTCTGGGA AAGAGCTGCA TATTAACCTT ATACCGAACA AACAAGATCG AACCCTCACT ATTGTGGATA CTGGAATTGG AATGACCAAG GCTGACTTGA TCAATAACCT TGGTACTATC GCCAAGTCTG GGACCAAAGC GTTCATGGAA GCTTTGCAGG CTGGTGCAGA TATCTCTATG ATTGGCCAGT TCGGTGTTGG TTTTTATTCT GCTTATTTGG TTGCTGAGAA AGTAACTGTG ATCACCAAAC ATAATGATGA TGAGCAGTAC GCTTGGGAGT CCTCAGCAGG GGGATCATTC ACAGTGAGGA CAGACACAGG TGAACCTATG GGTCGTGGAA CAAAAGTTAT CCCACACCTG AAAGAAGACC AAACTGAGTA CTTGGAGGAA CGAAGAATAA AGGAGATTGT GAAGAAACAT TCTCAGTTTA TTGGATATCC CATTACTCTT TTTGTGGAGA AGGAACGTGA TAAAGAAGTC AGCGATGATG AGGCTGAAGA AAAGGAAGAC AAAGAAGAAG AAAAAGAAAA AGAAGAGAAA GAGTCGGAAG ACAAACCTGA AATTGAAGAT GTTGGTTCTG ATGAGGAAGA AGAAGAAAAG AAGGATGGTG ACAAGAAGAA GAAGAAGAAG ATTAAGGAAA AGTACATCGA TCAAGAAGAG CTCAACAAAA CAAAGCCCAT CTGGACCAGA AATCCCGACG ATATTACTAA TGAGGAGTAC GGAGAATTCT ATAAGAGCTT GACCAATGAC TGGGAAGATC ACTTGGCAGT GAAGCATTTT TCAGTTGAAG GACAGTTGGA ATTCAGAGCC CTTCTATTTG TCCCACGACG TGCTCCTTTT GATCTGTTTG AAAACAGAAA GAAAAAGAAC AACATCAAAT TGTATGTACG CAGAGTTTTC ATCATGGATA ACTGTGAGGA GCTAATCCCT GAGTATCTGA ACTTCATTAG AGGGGTGGTA GACTCGGAGG ACCTCCCTCT AAACATTTCC CGTGAGATGT TGCAACAAAG CAAAATTTTG AAAGTTATCA GGAAGAATTT GGTCAAAAAA TGCTTAGAAC TTTTTACTGA ACTGGCGGAA GATAAAGAGA ACTACAAGAA ATTCTATGAG CAGTTCTCTA AAAACATAAA GCTTGGAATA CACGAAGACT CTCAAAATCG GAAGAAGCTT TCAGAGCTGT TAAGGTACTA CACATCTGCC TCTGGTGATG AGATGGTTTC TCTCAAGGAC TACTGCACCA GAATGAAGGA GAACCAGAAA CATATCTATT ATATCACAGG TGAGACCAAG GACCAGGTAG CTAACTCAGC CTTTGTGGAA CGTCTTCGGA AACACGGCTT AGAAGTGATC TATATGATTG AGCCCATTGA TGAGTACTGT GTCCAACAGC TGAAGGAATT TGAGGGGAAG ACTTTAGTGT CAGTCACCAA AGAAGGCCTG GAACTTCCAG AGGATGAAGA AGAGAAAAAG AAACAGGAAG AGAAAAAAAC AAAGTTTGAG AACCTCTGCA AAATCATGAA AGACATACTG GAGAAAAAAG TTGAAAAGGT GGTTGTGTCA AACCGATTGG TGACATCTCC ATGCTGTATT GTCACAAGCA CATATGGCTG GACAGCAAAC ATGGAGAGAA TCATGAAAGC TCAAGCCCTA AGAGACAACT CAACAATGGG TTACATGGCA GCAAAGAAAC ACCTGGAGAT AAACCCTGAC CATTCCATTA TTGAGACCTT AAGGCAAAAG GCAGAGGCTG ATAAGAACGA CAAGTCTGTG AAGGATCTGG TCATCTTGCT TTATGAAACT GCGCTCCTGT CTTCTGGCTT CAGTCTGGAA GATCCCCAGA CACATGCTAA CAGGATCTAC AGGATGATCA AACTTGGTCT GGGTATTGAT GAAGATGACC CTACTGCTGA TGATACCAGT GCTGCTGTAA CTGAAGAAAT GCCACCCCTT GAAGGAGATG ACGACACATC ACGCATGGAA GAAGTAGACT AA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001092042.1 |
CDS | 60..2261 |
Translation | |
Target ORF information:
RefSeq Version | NM_001098572.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes heat shock protein 90 alpha family class A member 1 (HSP90AA1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001098572.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161
| ATGCCTGAGG AAACCCAGAC CCAAGACCAA CCGATGGAGG AGGAGGAGGT TGAGACTTTC GCCTTTCAGG CAGAAATTGC CCAGTTGATG TCATTGATCA TCAATACTTT CTACTCGAAC AAAGAGATCT TTCTGAGAGA GCTCATTTCA AATTCATCAG ATGCGTTGGA CAAAATCCGG TATGAAAGCT TGACAGATCC CAGTAAATTA GACTCTGGGA AAGAGCTGCA TATTAACCTT ATACCGAACA AACAAGATCG AACCCTCACT ATTGTGGATA CTGGAATTGG AATGACCAAG GCTGACTTGA TCAATAACCT TGGTACTATC GCCAAGTCTG GGACCAAAGC GTTCATGGAA GCTTTGCAGG CTGGTGCAGA TATCTCTATG ATTGGCCAGT TCGGTGTTGG TTTTTATTCT GCTTATTTGG TTGCTGAGAA AGTAACTGTG ATCACCAAAC ATAATGATGA TGAGCAGTAC GCTTGGGAGT CCTCAGCAGG GGGATCATTC ACAGTGAGGA CAGACACAGG TGAACCTATG GGTCGTGGAA CAAAAGTTAT CCCACACCTG AAAGAAGACC AAACTGAGTA CTTGGAGGAA CGAAGAATAA AGGAGATTGT GAAGAAACAT TCTCAGTTTA TTGGATATCC CATTACTCTT TTTGTGGAGA AGGAACGTGA TAAAGAAGTC AGCGATGATG AGGCTGAAGA AAAGGAAGAC AAAGAAGAAG AAAAAGAAAA AGAAGAGAAA GAGTCGGAAG ACAAACCTGA AATTGAAGAT GTTGGTTCTG ATGAGGAAGA AGAAGAAAAG AAGGATGGTG ACAAGAAGAA GAAGAAGAAG ATTAAGGAAA AGTACATCGA TCAAGAAGAG CTCAACAAAA CAAAGCCCAT CTGGACCAGA AATCCCGACG ATATTACTAA TGAGGAGTAC GGAGAATTCT ATAAGAGCTT GACCAATGAC TGGGAAGATC ACTTGGCAGT GAAGCATTTT TCAGTTGAAG GACAGTTGGA ATTCAGAGCC CTTCTATTTG TCCCACGACG TGCTCCTTTT GATCTGTTTG AAAACAGAAA GAAAAAGAAC AACATCAAAT TGTATGTACG CAGAGTTTTC ATCATGGATA ACTGTGAGGA GCTAATCCCT GAGTATCTGA ACTTCATTAG AGGGGTGGTA GACTCGGAGG ACCTCCCTCT AAACATTTCC CGTGAGATGT TGCAACAAAG CAAAATTTTG AAAGTTATCA GGAAGAATTT GGTCAAAAAA TGCTTAGAAC TTTTTACTGA ACTGGCGGAA GATAAAGAGA ACTACAAGAA ATTCTATGAG CAGTTCTCTA AAAACATAAA GCTTGGAATA CACGAAGACT CTCAAAATCG GAAGAAGCTT TCAGAGCTGT TAAGGTACTA CACATCTGCC TCTGGTGATG AGATGGTTTC TCTCAAGGAC TACTGCACCA GAATGAAGGA GAACCAGAAA CATATCTATT ATATCACAGG TGAGACCAAG GACCAGGTAG CTAACTCAGC CTTTGTGGAA CGTCTTCGGA AACACGGCTT AGAAGTGATC TATATGATTG AGCCCATTGA TGAGTACTGT GTCCAACAGC TGAAGGAATT TGAGGGGAAG ACTTTAGTGT CAGTCACCAA AGAAGGCCTG GAACTTCCAG AGGATGAAGA AGAGAAAAAG AAACAGGAAG AGAAAAAAAC AAAGTTTGAG AACCTCTGCA AAATCATGAA AGACATACTG GAGAAAAAAG TTGAAAAGGT GGTTGTGTCA AACCGATTGG TGACATCTCC ATGCTGTATT GTCACAAGCA CATATGGCTG GACAGCAAAC ATGGAGAGAA TCATGAAAGC TCAAGCCCTA AGAGACAACT CAACAATGGG TTACATGGCA GCAAAGAAAC ACCTGGAGAT AAACCCTGAC CATTCCATTA TTGAGACCTT AAGGCAAAAG GCAGAGGCTG ATAAGAACGA CAAGTCTGTG AAGGATCTGG TCATCTTGCT TTATGAAACT GCGCTCCTGT CTTCTGGCTT CAGTCTGGAA GATCCCCAGA CACATGCTAA CAGGATCTAC AGGATGATCA AACTTGGTCT GGGTATTGAT GAAGATGACC CTACTGCTGA TGATACCAGT GCTGCTGTAA CTGAAGAAAT GCCACCCCTT GAAGGAGATG ACGACACATC ACGCATGGAA GAAGTAGACT AA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc67768 |
Clone ID Related Accession (Same CDS sequence) |
XM_016925810.1
|
Accession Version |
XM_016925810.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2202bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-01 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
heat shock protein HSP 90-alpha isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006481.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Pan troglodytes Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161
| ATGCCTGAGG AAACCCAGAC CCAAGACCAA CCGATGGAGG AGGAGGAGGT TGAGACTTTC GCCTTTCAGG CAGAAATTGC CCAGTTGATG TCATTGATCA TCAATACTTT CTACTCGAAC AAAGAGATCT TTCTGAGAGA GCTCATTTCA AATTCATCAG ATGCGTTGGA CAAAATCCGG TATGAAAGCT TGACAGATCC CAGTAAATTA GACTCTGGGA AAGAGCTGCA TATTAACCTT ATACCGAACA AACAAGATCG AACCCTCACT ATTGTGGATA CTGGAATTGG AATGACCAAG GCTGACTTGA TCAATAACCT TGGTACTATC GCCAAGTCTG GGACCAAAGC GTTCATGGAA GCTTTGCAGG CTGGTGCAGA TATCTCTATG ATTGGCCAGT TCGGTGTTGG TTTTTATTCT GCTTATTTGG TTGCTGAGAA AGTAACTGTG ATCACCAAAC ATAATGATGA TGAGCAGTAC GCTTGGGAGT CCTCAGCAGG GGGATCATTC ACAGTGAGGA CAGACACAGG TGAACCTATG GGTCGTGGAA CAAAAGTTAT CCTACACCTG AAAGAAGACC AAACTGAGTA CTTGGAGGAA CGAAGAATAA AGGAGATTGT GAAGAAACAT TCTCAGTTTA TTGGATATCC CATTACTCTT TTTGTGGAGA AGGAACGTGA TAAAGAAGTC AGCGATGATG AGGCTGAAGA AAAGGAAGAC AAAGAAGAAG AAAAAGAAAA AGAAGAGAAA GAGTCGGAAG ACAAACCTCA AATTGAAGAT GTTGGTTCTG ATGAGGAAGA AGAAGAAAAG AAGGATGGTG ACAAGAAGAA GAAGAAGAAG ATTAAGGAAA AGTACATCGA TCAAGAAGAG CTCAACAAAA CAAAGCCCAT CTGGACCAGA AATCCCGACG ATATTACTAA TGAGGAGTAC GGAGAATTCT ATAAGAGCTT GACCAATGAC TGGGAAGATC ACTTGGCAGT GAAGCATTTT TCAGTTGAAG GACAGTTGGA ATTCAGAGCC CTTCTATTTG TCCCACGACG TGCTCCTTTT GATCTGTTTG AAAACAGAAA GAAAAAGAAC AACATCAAAT TGTATGTACG CAGAGTTTTC ATCATGGATA ACTGTGAGGA GCTAATCCCT GAGTATCTGA ACTTCATTAG AGGGGTGGTA GACTCGGAGG ACCTCCCTCT AAACATTTCC CGTGAGATGT TGCAACAAAG CAAAATTTTG AAAGTTATCA GGAAGAATTT GGTCAAAAAA TGCTTAGAAC TTTTTACTGA ACTGGCGGAA GATAAAGAGA ACTACAAGAA ATTCTATGAG CAGTTCTCTA AAAACATAAA GCTTGGAATA CACGAAGACT CTCAAAATCG GAAGAAGCTT TCAGAGCTGT TAAGGTACTA CACATCTGCC TCTGGTGATG AGATGGTTTC TCTCAAGGAC TACTGCACCA GAATGAAGGA GAACCAGAAA CATATCTATT ATATCACAGG TGAGACCAAG GACCAGGTAG CTAACTCAGC CTTTGTGGAA CGTCTTCGGA AACACGGCTT AGAAGTGATC TATATGATTG AGCCCATTGA TGAGTACTGT GTCCAACAGC TGAAGGAATT TGAGGGGAAG ACTTTAGTGT CAGTCACCAA AGAAGGCCTG GAACTTCCAG AGGATGAAGA AGAGAAAAAG AAACAGGAAG AGAAAAAAAC AAAGTTTGAG AACCTCTGCA AAATCATGAA AGACATACTG GAGAAAAAAG TTGAAAAGGT GGTTGTGTCA AACCGATTGG TGACATCTCC ATGCTGTATT GTCACAAGCA CATATGGCTG GACAGCAAAC ATGGAGAGAA TCATGAAAGC TCAAGCCCTA AGAGACAACT CAACAATGGG TTACATGGCA GCAAAGAAAC ACCTGGAGAT AAACCCTGAC CATTCCATTA TTGAGACCTT AAGGCAAAAG GCAGAGGCTG ATAAGAACGA CAAGTCTGTG AAGGATCTGG TCATCTTGCT TTATGAAACT GCGCTCCTGT CTTCTGGCTT CAGTCTGGAA GATCCCCAGA CACATGCTAA CAGGATCTAC AGGATGATCA AACTTGGTCT GGGTATTGAT GAAGATGACC CTACTGCTGA TGATACCAGT GCTGCTGTAA CTGAAGAAAT GCCACCCCTT GAAGGAGATG ACGACACATC ACGCATGGAA GAAGTAGACT AA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016781299.1 |
CDS | 174..2375 |
Translation | |
Target ORF information:
RefSeq Version | XM_016925810.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes heat shock protein 90kDa alpha family class A member 1 (HSP90AA1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016925810.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161
| ATGCCTGAGG AAACCCAGAC CCAAGACCAA CCGATGGAGG AGGAGGAGGT TGAGACTTTC GCCTTTCAGG CAGAAATTGC CCAGTTGATG TCATTGATCA TCAATACTTT CTACTCGAAC AAAGAGATCT TTCTGAGAGA GCTCATTTCA AATTCATCAG ATGCGTTGGA CAAAATCCGG TATGAAAGCT TGACAGATCC CAGTAAATTA GACTCTGGGA AAGAGCTGCA TATTAACCTT ATACCGAACA AACAAGATCG AACCCTCACT ATTGTGGATA CTGGAATTGG AATGACCAAG GCTGACTTGA TCAATAACCT TGGTACTATC GCCAAGTCTG GGACCAAAGC GTTCATGGAA GCTTTGCAGG CTGGTGCAGA TATCTCTATG ATTGGCCAGT TCGGTGTTGG TTTTTATTCT GCTTATTTGG TTGCTGAGAA AGTAACTGTG ATCACCAAAC ATAATGATGA TGAGCAGTAC GCTTGGGAGT CCTCAGCAGG GGGATCATTC ACAGTGAGGA CAGACACAGG TGAACCTATG GGTCGTGGAA CAAAAGTTAT CCTACACCTG AAAGAAGACC AAACTGAGTA CTTGGAGGAA CGAAGAATAA AGGAGATTGT GAAGAAACAT TCTCAGTTTA TTGGATATCC CATTACTCTT TTTGTGGAGA AGGAACGTGA TAAAGAAGTC AGCGATGATG AGGCTGAAGA AAAGGAAGAC AAAGAAGAAG AAAAAGAAAA AGAAGAGAAA GAGTCGGAAG ACAAACCTCA AATTGAAGAT GTTGGTTCTG ATGAGGAAGA AGAAGAAAAG AAGGATGGTG ACAAGAAGAA GAAGAAGAAG ATTAAGGAAA AGTACATCGA TCAAGAAGAG CTCAACAAAA CAAAGCCCAT CTGGACCAGA AATCCCGACG ATATTACTAA TGAGGAGTAC GGAGAATTCT ATAAGAGCTT GACCAATGAC TGGGAAGATC ACTTGGCAGT GAAGCATTTT TCAGTTGAAG GACAGTTGGA ATTCAGAGCC CTTCTATTTG TCCCACGACG TGCTCCTTTT GATCTGTTTG AAAACAGAAA GAAAAAGAAC AACATCAAAT TGTATGTACG CAGAGTTTTC ATCATGGATA ACTGTGAGGA GCTAATCCCT GAGTATCTGA ACTTCATTAG AGGGGTGGTA GACTCGGAGG ACCTCCCTCT AAACATTTCC CGTGAGATGT TGCAACAAAG CAAAATTTTG AAAGTTATCA GGAAGAATTT GGTCAAAAAA TGCTTAGAAC TTTTTACTGA ACTGGCGGAA GATAAAGAGA ACTACAAGAA ATTCTATGAG CAGTTCTCTA AAAACATAAA GCTTGGAATA CACGAAGACT CTCAAAATCG GAAGAAGCTT TCAGAGCTGT TAAGGTACTA CACATCTGCC TCTGGTGATG AGATGGTTTC TCTCAAGGAC TACTGCACCA GAATGAAGGA GAACCAGAAA CATATCTATT ATATCACAGG TGAGACCAAG GACCAGGTAG CTAACTCAGC CTTTGTGGAA CGTCTTCGGA AACACGGCTT AGAAGTGATC TATATGATTG AGCCCATTGA TGAGTACTGT GTCCAACAGC TGAAGGAATT TGAGGGGAAG ACTTTAGTGT CAGTCACCAA AGAAGGCCTG GAACTTCCAG AGGATGAAGA AGAGAAAAAG AAACAGGAAG AGAAAAAAAC AAAGTTTGAG AACCTCTGCA AAATCATGAA AGACATACTG GAGAAAAAAG TTGAAAAGGT GGTTGTGTCA AACCGATTGG TGACATCTCC ATGCTGTATT GTCACAAGCA CATATGGCTG GACAGCAAAC ATGGAGAGAA TCATGAAAGC TCAAGCCCTA AGAGACAACT CAACAATGGG TTACATGGCA GCAAAGAAAC ACCTGGAGAT AAACCCTGAC CATTCCATTA TTGAGACCTT AAGGCAAAAG GCAGAGGCTG ATAAGAACGA CAAGTCTGTG AAGGATCTGG TCATCTTGCT TTATGAAACT GCGCTCCTGT CTTCTGGCTT CAGTCTGGAA GATCCCCAGA CACATGCTAA CAGGATCTAC AGGATGATCA AACTTGGTCT GGGTATTGAT GAAGATGACC CTACTGCTGA TGATACCAGT GCTGCTGTAA CTGAAGAAAT GCCACCCCTT GAAGGAGATG ACGACACATC ACGCATGGAA GAAGTAGACT AA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Functional & integrative genomics11(3)507-17(2011 Sep)
Kim RN,Kim DW,Choi SH,Chae SH,Nam SH,Kim DW,Kim A,Kang A,Park KH,Lee YS,Hirai M,Suzuki Y,Sugano S,Hashimoto K,Kim DS,Park HS |