mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_008760137.2 |
XP_008758359.1 |
Bardet-Biedl syndrome 1 protein isoform X1 |
NM_001107569.1 |
NP_001101039.1 |
Bardet-Biedl syndrome 1 protein |
Homo sapiens (human) |
BBS1 |
NP_078925.3 |
Canis lupus familiaris (dog) |
BBS1 |
XP_540830.2 |
Bos taurus (cattle) |
BBS1 |
XP_003588094.2 |
Mus musculus (house mouse) |
Bbs1 |
NP_001028300.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP007459 |
XP_308406.4 |
Pan troglodytes (chimpanzee) |
BBS1 |
XP_001171950.1 |
Rattus norvegicus (Norway rat) |
Bbs1 |
NP_001101039.1 |
Danio rerio (zebrafish) |
bbs1 |
NP_001091721.1 |
Drosophila melanogaster (fruit fly) |
BBS1 |
NP_648080.1 |
Caenorhabditis elegans (roundworm) |
bbs-1 |
NP_740933.1 |
Xenopus tropicalis (tropical clawed frog) |
bbs1 |
NP_001116276.1 |
Related articles in PubMed
DAZ-interacting Protein 1 (Dzip1) Phosphorylation by Polo-like Kinase 1 (Plk1) Regulates the Centriolar Satellite Localization of the BBSome Protein during the Cell Cycle.
Zhang B, Wang G, Xu X, Yang S, Zhuang T, Wang G, Ren H, Cheng SY, Jiang Q, Zhang C
The Journal of biological chemistry292(4)1351-1360(2017 01)
The centriolar satellite protein AZI1 interacts with BBS4 and regulates ciliary trafficking of the BBSome.
Chamling X, Seo S, Searby CC, Kim G, Slusarski DC, Sheffield VC
PLoS genetics10(2)e1004083(2014 Feb)
BBS mutations modify phenotypic expression of CEP290-related ciliopathies.
Zhang Y, Seo S, Bhattarai S, Bugge K, Searby CC, Zhang Q, Drack AV, Stone EM, Sheffield VC
Human molecular genetics23(1)40-51(2014 Jan)
Abnormal development of NG2+PDGFR-?+ neural progenitor cells leads to neonatal hydrocephalus in a ciliopathy mouse model.
Carter CS, Vogel TW, Zhang Q, Seo S, Swiderski RE, Moninger TO, Cassell MD, Thedens DR, Keppler-Noreuil KM, Nopoulos P, Nishimura DY, Searby CC, Bugge K, Sheffield VC
Nature medicine18(12)1797-804(2012 Dec)
Intrinsic protein-protein interaction-mediated and chaperonin-assisted sequential assembly of stable bardet-biedl syndrome protein complex, the BBSome.
Zhang Q, Yu D, Seo S, Stone EM, Sheffield VC
The Journal of biological chemistry287(24)20625-35(2012 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Bbs1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Bbs1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
ORa04026 |
Clone ID Related Accession (Same CDS sequence) |
NM_001107569.1
|
Accession Version |
NM_001107569.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1785bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-04-18 |
Organism |
Rattus norvegicus(Norway rat) |
Product |
Bardet-Biedl syndrome 1 protein |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473953.1. On or before Oct 4, 2007 this sequence version replaced XM_219691.4, XM_001069507.1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGGCTGCGA CGACGTCTTC ACCGGATTCT GACAGCGGGC GAGCTGAGAG CAACGAAGCC AATTCGAAAT GGCTGGATGC ACACTACGAC CCCATGGCCA ACATCCATAC CTTCTCCTCC TGCCTGGCAC TGGCAGATTT GCATGGCGAC GGGGAGTACA AGCTGGTGGT GGGAGACCTT GGCCCAGGTG GGCAGCAGCC CCGCCTGAAG GTGCTCAAAG GACCCACAGT GCTGACAGAA AGCCCACTGC CTGCCCTGCC AGCCTCGGCT GCCACCTTCC TCATGGACCA ACATGAGCCC AGGACACCTG CCTTAGCACT CGCTTCAGGA CCTTGTGTCT ATGTTTATAA GAACCTTCGA CCCTACTTCA AGTTCAGCCT GCCCCAGTTA CCTCCAAACC CTTTGGAACA AGACCTTTGG AACCAAGCCA AAGAGGACCG GATTGACCCC TTAACCCTGA AGGAGATGCT GGAGGACATC AGGGAAAAGG CAGAGGTGCC TTTGTCTGTG CAGTCACTCA GGTTTCTGCA GCTGGAGCTG AATGAAATGG AGGCGTTTGT GAACCAGCAC AAGTCCAAGG TTATCAAGCG TCAGACAGTC ATCACCACCA TGACCACCCT GAAGAAGAAC CTGGCAGATG AGGATGCAGT GTCCTGTCTG GTGCTAGGCA CTGAGAACAA GGAGCTCCTA GTGCTGGACC CTGAAGCTTT CACCATTTTG ACCAAGATGA GCCTGCCCAG TGTCCCTGTC TTCCTGGAGG TTTCTGGCCA GTTTGATGTG GAGTTCCGAT TGACTGCTGC CTGCCGAGAT GGGAGCATCT ATATCCTGAG AAGAGACTCC AAACACCCCA AGTACTGCAT CGAGTTGAGT GCCCAGCCTG TGGGGCTGGT CCGGGTACAC AAGATCCTGG TGGTGGGCAG CACCCAAGAG AGTCTGCATG GCTTCACCCA CAAGGGTAAG AAGCTGTGGA CGGTGCAGAT GCCTGCAGCC ATCCTGACCA TGAACCTTCT GGAGCAGCGA TCCCGAGGCC TGCAAGCTGT CATGGCCGCT TTGGCCAATG GGGAAGTCCG GATTTACCGT GACAAGGCCC TGCTCAATGT CGTCCGGGCC CCTGATGCAG TAACCAGCCT GTGCTTTGGC CGATATGGAC GAGAAGATAA CACCCTCATC ATGACTACTA GAGGTGGGGG CCTGATCATC AAGATCCTGA AGCGCACAGC AGTGTTTGTG GAAGGGACAG GCGAGGTGGG CCCACCGCTA GCACAGACAA CAAAACTCAG TGTGCCCCGA AAGACCCGGC TGTATGTGGA TCAGACCCTA CGGGAGCGAG AAGCTGGCAC AGTCATGCAC CGGACCTTCC AGACTGACCT CTACCTGCTG CGTCTACGAG CTGCCAGAGC CTATGTTCAG GCCCTGGAGT CCAGCCTGAG CCCCATGTCA GCCACAGCTC GGGAGCCACT CAAGCTGCAC GCTGTGGTTC AAGGCCTGGG CCCCACCTTT AAGCTCACAC TTCACCTGCA GAATACCTCA ACGGCTCGGC CAGTACTGGG GCTACAGGTC TGCTTCCTGT ACAACGAGGC ATTTTATGCC CTGCCTCGGG CCTTCTTTAA GGTTCCCTTG CTGGTGCCAG GACTCAGTTA CCCACTGGAG ACCTTTGTAG AGAGTCTCAG CAGCAAGGGC ATCTCAGACA TAATCAAGGT GCTCGTGCTC CGGGAAGGCC AGAGTGCACC CCTGCTGAGT GCCCACATCA ACATGCCTGT GAGTGAAGGT CTGGCAGCTG CCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001101039.1 |
CDS | 41..1825 |
Translation | |
Target ORF information:
RefSeq Version | NM_001107569.1 |
Organism | Rattus norvegicus(Norway rat) |
Definition | Rattus norvegicus Bardet-Biedl syndrome 1 (Bbs1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001107569.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGGCTGCGA CGACGTCTTC ACCGGATTCT GACAGCGGGC GAGCTGAGAG CAACGAAGCC AATTCGAAAT GGCTGGATGC ACACTACGAC CCCATGGCCA ACATCCATAC CTTCTCCTCC TGCCTGGCAC TGGCAGATTT GCATGGCGAC GGGGAGTACA AGCTGGTGGT GGGAGACCTT GGCCCAGGTG GGCAGCAGCC CCGCCTGAAG GTGCTCAAAG GACCCACAGT GCTGACAGAA AGCCCACTGC CTGCCCTGCC AGCCTCGGCT GCCACCTTCC TCATGGACCA ACATGAGCCC AGGACACCTG CCTTAGCACT CGCTTCAGGA CCTTGTGTCT ATGTTTATAA GAACCTTCGA CCCTACTTCA AGTTCAGCCT GCCCCAGTTA CCTCCAAACC CTTTGGAACA AGACCTTTGG AACCAAGCCA AAGAGGACCG GATTGACCCC TTAACCCTGA AGGAGATGCT GGAGGACATC AGGGAAAAGG CAGAGGTGCC TTTGTCTGTG CAGTCACTCA GGTTTCTGCA GCTGGAGCTG AATGAAATGG AGGCGTTTGT GAACCAGCAC AAGTCCAAGG TTATCAAGCG TCAGACAGTC ATCACCACCA TGACCACCCT GAAGAAGAAC CTGGCAGATG AGGATGCAGT GTCCTGTCTG GTGCTAGGCA CTGAGAACAA GGAGCTCCTA GTGCTGGACC CTGAAGCTTT CACCATTTTG ACCAAGATGA GCCTGCCCAG TGTCCCTGTC TTCCTGGAGG TTTCTGGCCA GTTTGATGTG GAGTTCCGAT TGACTGCTGC CTGCCGAGAT GGGAGCATCT ATATCCTGAG AAGAGACTCC AAACACCCCA AGTACTGCAT CGAGTTGAGT GCCCAGCCTG TGGGGCTGGT CCGGGTACAC AAGATCCTGG TGGTGGGCAG CACCCAAGAG AGTCTGCATG GCTTCACCCA CAAGGGTAAG AAGCTGTGGA CGGTGCAGAT GCCTGCAGCC ATCCTGACCA TGAACCTTCT GGAGCAGCGA TCCCGAGGCC TGCAAGCTGT CATGGCCGCT TTGGCCAATG GGGAAGTCCG GATTTACCGT GACAAGGCCC TGCTCAATGT CGTCCGGGCC CCTGATGCAG TAACCAGCCT GTGCTTTGGC CGATATGGAC GAGAAGATAA CACCCTCATC ATGACTACTA GAGGTGGGGG CCTGATCATC AAGATCCTGA AGCGCACAGC AGTGTTTGTG GAAGGGACAG GCGAGGTGGG CCCACCGCTA GCACAGACAA CAAAACTCAG TGTGCCCCGA AAGACCCGGC TGTATGTGGA TCAGACCCTA CGGGAGCGAG AAGCTGGCAC AGTCATGCAC CGGACCTTCC AGACTGACCT CTACCTGCTG CGTCTACGAG CTGCCAGAGC CTATGTTCAG GCCCTGGAGT CCAGCCTGAG CCCCATGTCA GCCACAGCTC GGGAGCCACT CAAGCTGCAC GCTGTGGTTC AAGGCCTGGG CCCCACCTTT AAGCTCACAC TTCACCTGCA GAATACCTCA ACGGCTCGGC CAGTACTGGG GCTACAGGTC TGCTTCCTGT ACAACGAGGC ATTTTATGCC CTGCCTCGGG CCTTCTTTAA GGTTCCCTTG CTGGTGCCAG GACTCAGTTA CCCACTGGAG ACCTTTGTAG AGAGTCTCAG CAGCAAGGGC ATCTCAGACA TAATCAAGGT GCTCGTGCTC CGGGAAGGCC AGAGTGCACC CCTGCTGAGT GCCCACATCA ACATGCCTGT GAGTGAAGGT CTGGCAGCTG CCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ORa46722 |
Clone ID Related Accession (Same CDS sequence) |
XM_008760137.2
|
Accession Version |
XM_008760137.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1650bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-07-25 |
Organism |
Rattus norvegicus(Norway rat) |
Product |
Bardet-Biedl syndrome 1 protein isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_008760137.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621
| ATGGCTGCGA CGACGTCTTC ACCGGATTCT GACAGCGGGC GAGCTGAGAG CAACGAAGCC AATTCGAAAT GGCTGGATGC ACACTACGAC CCCATGGCCA ACATCCATAC CTTCTCCTCC TGCCTGGCAC TGGCAGATTT GCATGGCGAC GGGGAGTACA AGCTGGTGGT GGGAGACCTT GGCCCAGGTG GGCAGCAGCC CCGCCTGAAG GTGCTCAAAG GACCCACAGT GCTGACAGAA AGCCCACTGC CTGCCCTGCC AGCCTCGGCT GCCACCTTCC TCATGGACCA ACATGAGCCC AGGACACCTG CCTTAGCACT CGCTTCAGGA CCTTGTGTCT ATGTTTATAA GAACCTTCGA CCCTACTTCA AGTTCAGCCT GCCCCAGTTA CCTCCAAACC CTTTGGAACA AGACCTTTGG AACCAAGCCA AAGAGGACCG GATTGACCCC TTAACCCTGA AGGAGATGCT GGAGGACATC AGGGAAAAGG CAGAGGTGCC TTTGTCTGTG CAGTCACTCA GGTTTCTGCA GCTGGAGCTG AATGAAATGG AGGCGTTTGT GAACCAGCAC AAGTCCAAGG TTATCAAGCG TCAGACAGTC ATCACCACCA TGACCACCCT GAAGAAGAAC CTGGCAGATG AGGATGCAGT GTCCTGTCTG GTGCTAGGCA CTGAGAACAA GGAGCTCCTA GTGCTGGACC CTGAAGCTTT CACCATTTTG ACCAAGATGA GCCTGCCCAG TGTCCCTGTC TTCCTGGAGG TTTCTGGCCA GTTTGATGTG GAGTTCCGAT TGACTGCTGC CTGCCGAGAT GGGAGCATCT ATATCCTGAG AAGAGACTCC AAACACCCCA AGTACTGCAT CGAGTTGAGT GCCCAGCCTG TGGGGCTGGT CCGGGTACAC AAGATCCTGG TGGTGGGCAG CACCCAAGAG AGTCTGCATG GCTTCACCCA CAAGGGTAAG AAGCTGTGGA CGGTGCAGAT GCCTGCAGCC ATCCTGACCA TGAACCTTCT GGAGCAGCGA TCCCGAGGCC TGCAAGCTGT CATGGCCGCT TTGGCCAATG GGGAAGTCCG GATTTACCGT GACAAGGCCC TGCTCAATGT CGTCCGGGCC CCTGATGCAG TAACCAGCCT GTGCTTTGGC CGATATGGAC GAGAAGATAA CACCCTCATC ATGACTACTA GAGGTGGGGG CCTGATCATC AAGATCCTGA AGCGCACAGC AGTGTTTGTG GAAGGGACAG GCGAGGTGGG CCCACCGCTA GCACAGACAA CAAAACTCAG TGTGCCCCGA AAGACCCGGC TGTATGTGGA TCAGACCCTA CGGGAGCGAG AAGCTGGCAC AGTCATGCAC CGGACCTTCC AGACTGACCT CTACCTGCTG CGTCTACGAG CTGCCAGAGC CTATGTTCAG GCCCTGGAGT CCAGCCTGAG CCCCATGTCA GCCACAGCTC GGGAGCCACT CAAGCTGCAC GCTGTGGTTC CCTTGCTGGT GCCAGGACTC AGTTACCCAC TGGAGACCTT TGTAGAGAGT CTCAGCAGCA AGGGCATCTC AGACATAATC AAGGTGCTCG TGCTCCGGGA AGGCCAGAGT GCACCCCTGC TGAGTGCCCA CATCAACATG CCTGTGAGTG AAGGTCTGGC AGCTGCCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_008758359.1 |
CDS | 59..1708 |
Translation | |
Target ORF information:
RefSeq Version | XM_008760137.2 |
Organism | Rattus norvegicus(Norway rat) |
Definition | Rattus norvegicus Bardet-Biedl syndrome 1 (Bbs1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_008760137.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621
| ATGGCTGCGA CGACGTCTTC ACCGGATTCT GACAGCGGGC GAGCTGAGAG CAACGAAGCC AATTCGAAAT GGCTGGATGC ACACTACGAC CCCATGGCCA ACATCCATAC CTTCTCCTCC TGCCTGGCAC TGGCAGATTT GCATGGCGAC GGGGAGTACA AGCTGGTGGT GGGAGACCTT GGCCCAGGTG GGCAGCAGCC CCGCCTGAAG GTGCTCAAAG GACCCACAGT GCTGACAGAA AGCCCACTGC CTGCCCTGCC AGCCTCGGCT GCCACCTTCC TCATGGACCA ACATGAGCCC AGGACACCTG CCTTAGCACT CGCTTCAGGA CCTTGTGTCT ATGTTTATAA GAACCTTCGA CCCTACTTCA AGTTCAGCCT GCCCCAGTTA CCTCCAAACC CTTTGGAACA AGACCTTTGG AACCAAGCCA AAGAGGACCG GATTGACCCC TTAACCCTGA AGGAGATGCT GGAGGACATC AGGGAAAAGG CAGAGGTGCC TTTGTCTGTG CAGTCACTCA GGTTTCTGCA GCTGGAGCTG AATGAAATGG AGGCGTTTGT GAACCAGCAC AAGTCCAAGG TTATCAAGCG TCAGACAGTC ATCACCACCA TGACCACCCT GAAGAAGAAC CTGGCAGATG AGGATGCAGT GTCCTGTCTG GTGCTAGGCA CTGAGAACAA GGAGCTCCTA GTGCTGGACC CTGAAGCTTT CACCATTTTG ACCAAGATGA GCCTGCCCAG TGTCCCTGTC TTCCTGGAGG TTTCTGGCCA GTTTGATGTG GAGTTCCGAT TGACTGCTGC CTGCCGAGAT GGGAGCATCT ATATCCTGAG AAGAGACTCC AAACACCCCA AGTACTGCAT CGAGTTGAGT GCCCAGCCTG TGGGGCTGGT CCGGGTACAC AAGATCCTGG TGGTGGGCAG CACCCAAGAG AGTCTGCATG GCTTCACCCA CAAGGGTAAG AAGCTGTGGA CGGTGCAGAT GCCTGCAGCC ATCCTGACCA TGAACCTTCT GGAGCAGCGA TCCCGAGGCC TGCAAGCTGT CATGGCCGCT TTGGCCAATG GGGAAGTCCG GATTTACCGT GACAAGGCCC TGCTCAATGT CGTCCGGGCC CCTGATGCAG TAACCAGCCT GTGCTTTGGC CGATATGGAC GAGAAGATAA CACCCTCATC ATGACTACTA GAGGTGGGGG CCTGATCATC AAGATCCTGA AGCGCACAGC AGTGTTTGTG GAAGGGACAG GCGAGGTGGG CCCACCGCTA GCACAGACAA CAAAACTCAG TGTGCCCCGA AAGACCCGGC TGTATGTGGA TCAGACCCTA CGGGAGCGAG AAGCTGGCAC AGTCATGCAC CGGACCTTCC AGACTGACCT CTACCTGCTG CGTCTACGAG CTGCCAGAGC CTATGTTCAG GCCCTGGAGT CCAGCCTGAG CCCCATGTCA GCCACAGCTC GGGAGCCACT CAAGCTGCAC GCTGTGGTTC CCTTGCTGGT GCCAGGACTC AGTTACCCAC TGGAGACCTT TGTAGAGAGT CTCAGCAGCA AGGGCATCTC AGACATAATC AAGGTGCTCG TGCTCCGGGA AGGCCAGAGT GCACCCCTGC TGAGTGCCCA CATCAACATG CCTGTGAGTG AAGGTCTGGC AGCTGCCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Abnormal development of NG2+PDGFR-?+ neural progenitor cells leads to neonatal hydrocephalus in a ciliopathy mouse model.
Nature medicine18(12)1797-804(2012 Dec)
Carter CS,Vogel TW,Zhang Q,Seo S,Swiderski RE,Moninger TO,Cassell MD,Thedens DR,Keppler-Noreuil KM,Nopoulos P,Nishimura DY,Searby CC,Bugge K,Sheffield VC |