Gene Symbol | Pip5k1c |
Entrez Gene ID | 314641 |
Full Name | phosphatidylinositol-4-phosphate 5-kinase type 1 gamma |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Pip5k1c cDNA ORF clone
Gene Symbol | Pip5k1c |
Entrez Gene ID | 314641 |
Full Name | phosphatidylinositol-4-phosphate 5-kinase type 1 gamma |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001009967.2 | NP_001009967.2 | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform c |
XM_008765103.2 | XP_008763325.1 | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X2 |
XM_006240935.3 | XP_006240997.1 | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X3 |
XM_017594818.1 | XP_017450307.1 | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X4 |
XM_008765101.2 | XP_008763323.1 | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1 |
NM_001033970.1 | NP_001029142.1 | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform b |
Canis lupus familiaris (dog) | PIP5K1C | XP_542172.5 |
Danio rerio (zebrafish) | si:ch211-243a15.1 | XP_005171520.1 |
Homo sapiens (human) | PIP5K1C | NP_036530.1 |
Bos taurus (cattle) | PIP5K1C | NP_001192574.1 |
Danio rerio (zebrafish) | pip5k1cb | XP_005163702.1 |
Xenopus tropicalis (tropical clawed frog) | pip5k1c | NP_001120474.1 |
LOC721744 | XP_002801072.1 | |
Rattus norvegicus (Norway rat) | Pip5k1c | NP_001009967.2 |
Pan troglodytes (chimpanzee) | PIP5K1C | XP_512274.3 |
Mus musculus (house mouse) | Pip5k1c | NP_032870.2 |
Gallus gallus (chicken) | PIP5K1C | XP_418191.4 |
LAPTM4B is a PtdIns(4,5)P2 effector that regulates EGFR signaling, lysosomal sorting, and degradation.
Tan X, Sun Y, Thapa N, Liao Y, Hedman AC, Anderson RA
The EMBO journal34(4)475-90(2015 Feb)
Platelets lacking PIP5KI? have normal integrin activation but impaired cytoskeletal-membrane integrity and adhesion.
Wang Y, Zhao L, Suzuki A, Lian L, Min SH, Wang Z, Litvinov RI, Stalker TJ, Yago T, Klopocki AG, Schmidtke DW, Yin H, Choi JK, McEver RP, Weisel JW, Hartwig JH, Abrams CS
Blood121(14)2743-52(2013 Apr)
Synaptic vesicle endocytosis.
Saheki Y, De Camilli P
Cold Spring Harbor perspectives in biology4(9)a005645(2012 Sep)
NMDA receptor-mediated PIP5K activation to produce PI(4,5)P? is essential for AMPA receptor endocytosis during LTD.
Unoki T, Matsuda S, Kakegawa W, Van NT, Kohda K, Suzuki A, Funakoshi Y, Hasegawa H, Yuzaki M, Kanaho Y
Neuron73(1)135-48(2012 Jan)
Phosphatidylinositol-4-phosphate 5-kinases and phosphatidylinositol 4,5-bisphosphate synthesis in the brain.
Volpicelli-Daley LA, Lucast L, Gong LW, Liu L, Sasaki J, Sasaki T, Abrams CS, Kanaho Y, De Camilli P
The Journal of biological chemistry285(37)28708-14(2010 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Pip5k1c gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pip5k1c cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa08798 | |
Clone ID Related Accession (Same CDS sequence) | NM_001033970.1 | |
Accession Version | NM_001033970.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1911bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-23 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform b | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CB557931.1, BC101909.1, CK366332.1, AY850259.1 and CB696331.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC101909.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001029142.1 |
CDS | 62..1972 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001033970.1 |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa29870 | |
Clone ID Related Accession (Same CDS sequence) | XM_006240935.3 | |
Accession Version | XM_006240935.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1989bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006240935.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006240997.1 |
CDS | 103..2091 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006240935.3 |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa01316 | |
Clone ID Related Accession (Same CDS sequence) | NM_001009967.2 | |
Accession Version | NM_001009967.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2067bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-23 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform c | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CB557931.1, AY850259.1, CK366332.1, BC101909.1, CB581409.1 and CB696331.1. On Aug 5, 2006 this sequence version replaced NM_001009967.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001009967.2 |
CDS | 62..2128 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001009967.2 |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa47339 | |
Clone ID Related Accession (Same CDS sequence) | XM_008765101.2 | |
Accession Version | XM_008765101.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2079bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008765101.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008763323.1 |
CDS | 104..2182 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008765101.2 |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa47341 | |
Clone ID Related Accession (Same CDS sequence) | XM_008765103.2 | |
Accession Version | XM_008765103.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2001bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008765103.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008763325.1 |
CDS | 103..2103 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008765103.2 |
1 | ATGGAGCTAG AGGTGCCGGA CGAGGCAGAG AGCGCCGAAG CAGGGGCCGT GACAGCGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa61990 | |
Clone ID Related Accession (Same CDS sequence) | XM_017594818.1 | |
Accession Version | XM_017594818.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1983bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCCAGA AGAAGGCTAT CCTTGCAGAG GCCCCGTTGG TGACAGGGCA GCCAGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017450307.1 |
CDS | 261..2243 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017594818.1 |
1 | ATGACCCAGA AGAAGGCTAT CCTTGCAGAG GCCCCGTTGG TGACAGGGCA GCCAGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
LAPTM4B is a PtdIns(4,5)P2 effector that regulates EGFR signaling, lysosomal sorting, and degradation. |
Platelets lacking PIP5KI? have normal integrin activation but impaired cytoskeletal-membrane integrity and adhesion. |
Synaptic vesicle endocytosis. |
NMDA receptor-mediated PIP5K activation to produce PI(4,5)P? is essential for AMPA receptor endocytosis during LTD. |
Phosphatidylinositol-4-phosphate 5-kinases and phosphatidylinositol 4,5-bisphosphate synthesis in the brain. |