Gene Symbol | DDX39B |
Entrez Gene ID | 540191 |
Full Name | DExD-box helicase 39B |
Synonyms | BAT1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » DDX39B cDNA ORF clone
Gene Symbol | DDX39B |
Entrez Gene ID | 540191 |
Full Name | DExD-box helicase 39B |
Synonyms | BAT1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001033629.2 | NP_001028801.1 | spliceosome RNA helicase DDX39B |
XM_010818356.2 | XP_010816658.1 | spliceosome RNA helicase DDX39B isoform X1 |
XM_010818356.1 | XP_010816658.1 | spliceosome RNA helicase DDX39B isoform X1 |
Rattus norvegicus (Norway rat) | Ddx39b | NP_579834.2 |
Danio rerio (zebrafish) | bat1 | NP_957237.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009075 | XP_319825.4 |
Oryza sativa (rice) | Os01g0550000 | NP_001043298.1 |
Homo sapiens (human) | DDX39B | NP_004631.1 |
Canis lupus familiaris (dog) | DDX39B | NP_001014399.1 |
Pan troglodytes (chimpanzee) | DDX39B | NP_001107635.1 |
DDX39B | NP_001040608.1 | |
Kluyveromyces lactis | KLLA0E21935g | XP_454944.1 |
Arabidopsis thaliana (thale cress) | AT5G11170 | NP_568244.2 |
Xenopus tropicalis (tropical clawed frog) | ddx39b | NP_989072.1 |
Bos taurus (cattle) | DDX39B | NP_001028801.1 |
Mus musculus (house mouse) | Ddx39b | NP_001239386.1 |
Drosophila melanogaster (fruit fly) | Hel25E | NP_723089.1 |
Schizosaccharomyces pombe (fission yeast) | uap56 | NP_594261.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_02806 | XP_003720935.1 |
Neurospora crassa | NCU09076 | XP_964893.2 |
Saccharomyces cerevisiae (baker's yeast) | SUB2 | NP_010199.1 |
Eremothecium gossypii | AGOS_ADR260C | NP_984356.1 |
Oryza sativa (rice) | Os01g0549700 | NP_001043297.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following DDX39B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DDX39B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa00700 | |
Clone ID Related Accession (Same CDS sequence) | NM_001033629.2 , XM_010818356.2 , XM_010818356.1 | |
Accession Version | NM_001033629.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1287bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-18 | |
Organism | Bos taurus(cattle) | |
Product | spliceosome RNA helicase DDX39B | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC102131.1. On Aug 31, 2012 this sequence version replaced NM_001033629.1. ##Evidence-Data-START## Transcript exon combination :: BC102131.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGAGA ACGATGTGGA CAATGAGCTC TTGGATTATG AAGATGATGA GGTGGAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001028801.1 |
CDS | 167..1453 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001033629.2 |
1 | ATGGCGGAGA ACGATGTGGA CAATGAGCTC TTGGATTATG AAGATGATGA GGTGGAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa00700 | |
Clone ID Related Accession (Same CDS sequence) | NM_001033629.2 , XM_010818356.2 , XM_010818356.1 | |
Accession Version | XM_010818356.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1287bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | spliceosome RNA helicase DDX39B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037350.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010818356.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGAGA ACGATGTGGA CAATGAGCTC TTGGATTATG AAGATGATGA GGTGGAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010816658.1 |
CDS | 845..2131 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010818356.2 |
1 | ATGGCGGAGA ACGATGTGGA CAATGAGCTC TTGGATTATG AAGATGATGA GGTGGAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa00700 | |
Clone ID Related Accession (Same CDS sequence) | NM_001033629.2 , XM_010818356.2 , XM_010818356.1 | |
Accession Version | XM_010818356.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1287bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | spliceosome RNA helicase DDX39B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104557.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGAGA ACGATGTGGA CAATGAGCTC TTGGATTATG AAGATGATGA GGTGGAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010816658.1 |
CDS | 822..2108 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010818356.1 |
1 | ATGGCGGAGA ACGATGTGGA CAATGAGCTC TTGGATTATG AAGATGATGA GGTGGAGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |