Gene Symbol | USF2 |
Entrez Gene ID | 567297 |
Full Name | upstream transcription factor 2, c-fos interacting |
Synonyms | fb12g11,si:dkey-211g8.3,wu:fb12g11 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » USF2 cDNA ORF clone
Gene Symbol | USF2 |
Entrez Gene ID | 567297 |
Full Name | upstream transcription factor 2, c-fos interacting |
Synonyms | fb12g11,si:dkey-211g8.3,wu:fb12g11 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_009294052.2 | XP_009292327.1 | upstream stimulatory factor 2 isoform X2 |
XM_005159453.4 | XP_005159510.1 | upstream stimulatory factor 2 isoform X2 |
NM_001122785.1 | NP_001116257.1 | upstream stimulatory factor 2 |
XM_021468099.1 | XP_021323774.1 | upstream stimulatory factor 2 isoform X1 |
XM_009294052.3 | XP_009292327.1 | upstream stimulatory factor 2 isoform X3 |
XM_005159453.3 | XP_005159510.1 | upstream stimulatory factor 2 isoform X1 |
Canis lupus familiaris (dog) | USF2 | XP_855488.3 |
Mus musculus (house mouse) | Usf2 | NP_035810.1 |
Danio rerio (zebrafish) | usf2 | NP_001116257.1 |
Xenopus tropicalis (tropical clawed frog) | usf2 | NP_001007857.1 |
LOC718527 | XP_001111345.2 | |
Bos taurus (cattle) | USF2 | NP_001001162.1 |
Rattus norvegicus (Norway rat) | Usf2 | NP_112401.1 |
Homo sapiens (human) | USF2 | NP_003358.1 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Phylogenetic analysis of zebrafish basic helix-loop-helix transcription factors.
Wang Y, Chen K, Yao Q, Zheng X, Yang Z
Journal of molecular evolution68(6)629-40(2009 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following USF2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the USF2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa34642 | |
Clone ID Related Accession (Same CDS sequence) | NM_001122785.1 | |
Accession Version | NM_001122785.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 987bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-26 | |
Organism | Danio rerio(zebrafish) | |
Product | upstream stimulatory factor 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR384101.11. On Mar 23, 2008 this sequence version replaced XM_690588.2. ##Evidence-Data-START## Transcript exon combination :: GFIL01042820.1, GDQQ01020098.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGATATGC TCGATCAGAG CTTGGACACC TCGACGAGTC ACGAGAAACA GGAAACTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001116257.1 |
CDS | 432..1418 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001122785.1 |
1 | ATGGATATGC TCGATCAGAG CTTGGACACC TCGACGAGTC ACGAGAAACA GGAAACTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa23897 | |
Clone ID Related Accession (Same CDS sequence) | XM_005159453.4 , XM_005159453.3 | |
Accession Version | XM_005159453.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 942bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | upstream stimulatory factor 2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005159453.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATATGC TCGATCAGAG CTTGGACACC TCGACGAGTC ACGAGAAACA GGAAACTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005159510.1 |
CDS | 713..1654 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005159453.4 |
1 | ATGGATATGC TCGATCAGAG CTTGGACACC TCGACGAGTC ACGAGAAACA GGAAACTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa23897 | |
Clone ID Related Accession (Same CDS sequence) | XM_005159453.4 , XM_005159453.3 | |
Accession Version | XM_005159453.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 942bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | upstream stimulatory factor 2 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005159453.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATATGC TCGATCAGAG CTTGGACACC TCGACGAGTC ACGAGAAACA GGAAACTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005159510.1 |
CDS | 733..1674 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005159453.3 |
1 | ATGGATATGC TCGATCAGAG CTTGGACACC TCGACGAGTC ACGAGAAACA GGAAACTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa45099 | |
Clone ID Related Accession (Same CDS sequence) | XM_009294052.2 , XM_009294052.3 | |
Accession Version | XM_009294052.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 489bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | upstream stimulatory factor 2 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009294052.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGAGTC CCCCAGATGT TTTACAAACT GGAACACCGC GGACCATTGC TCCTCGTACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009292327.1 |
CDS | 715..1203 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009294052.2 |
1 | ATGATGAGTC CCCCAGATGT TTTACAAACT GGAACACCGC GGACCATTGC TCCTCGTACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa45099 | |
Clone ID Related Accession (Same CDS sequence) | XM_009294052.2 , XM_009294052.3 | |
Accession Version | XM_009294052.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 489bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | upstream stimulatory factor 2 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009294052.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGAGTC CCCCAGATGT TTTACAAACT GGAACACCGC GGACCATTGC TCCTCGTACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009292327.1 |
CDS | 616..1104 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009294052.3 |
1 | ATGATGAGTC CCCCAGATGT TTTACAAACT GGAACACCGC GGACCATTGC TCCTCGTACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa23896 | |
Clone ID Related Accession (Same CDS sequence) | XM_021468099.1 | |
Accession Version | XM_021468099.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 963bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | upstream stimulatory factor 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGACAA CACATCACGA GAAACAGGAA ACTGAGGAGG TTGTTCAGCT ACAGGACGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021323774.1 |
CDS | 16..978 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021468099.1 |
1 | ATGCAGACAA CACATCACGA GAAACAGGAA ACTGAGGAGG TTGTTCAGCT ACAGGACGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
RFX transcription factors are essential for hearing in mice. |
Phylogenetic analysis of zebrafish basic helix-loop-helix transcription factors. |