chmp2a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Gene Symbol	chmp2a
Entrez Gene ID	798901
Full Name	charged multivesicular body protein 2A
Synonyms	bc2,fj10d05,wu:fi18h03,wu:fj10d05,zgc:55361
General protein information	Preferred Names charged multivesicular body protein 2A Names charged multivesicular body protein 2a chromatin modifying protein 2A chromatin-modifying protein 2a putative breast adenocarcinoma marker
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA Protein Name

NM_213517.1 NP_998682.1 charged multivesicular body protein 2a
Pathways from BioSystems

mRNA	Protein	Name
NM_213517.1	NP_998682.1	charged multivesicular body protein 2a

Homologies

Xenopus tropicalis (tropical clawed frog)	chmp2a	NP_001005008.1
Homo sapiens (human)	CHMP2A	NP_940818.1
Canis lupus familiaris (dog)	CHMP2A	XP_850536.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001285	XP_321862.3
Caenorhabditis elegans (roundworm)	vps-2	NP_496717.1
Schizosaccharomyces pombe (fission yeast)	did4	NP_593871.3
Oryza sativa (rice)	Os07g0236800	NP_001059248.1
Bos taurus (cattle)	CHMP2A	NP_001029722.1
Mus musculus (house mouse)	Chmp2a	NP_081161.1
Rattus norvegicus (Norway rat)	Chmp2a	NP_001102376.1
Danio rerio (zebrafish)	bc2	NP_998682.1
Neurospora crassa	NCU00435	XP_956699.1
Pan troglodytes (chimpanzee)	CHMP2A	XP_003316813.1
	CHMP2A	XP_001099219.1
Gallus gallus (chicken)	CHMP2A	NP_001074361.1
Drosophila melanogaster (fruit fly)	vps2	NP_651455.1
Magnaporthe oryzae (rice blast fungus)	MGG_05208	XP_003712753.1
Saccharomyces cerevisiae (baker's yeast)	DID4	NP_012924.2
Kluyveromyces lactis	KLLA0B13343g	XP_452125.1
Eremothecium gossypii	AGOS_ABR002C	NP_982948.1
Arabidopsis thaliana (thale cress)	VPS2.1	NP_565336.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Tissue-restricted expression of Nrf2 and its target genes in zebrafish with gene-specific variations in the induction profiles.
Nakajima H, Nakajima-Takagi Y, Tsujita T, Akiyama S, Wakasa T, Mukaigasa K, Kaneko H, Tamaru Y, Yamamoto M, Kobayashi M
PloS one6(10)e26884(2011)

Many genes in fish have species-specific asymmetric rates of molecular evolution.
Steinke D, Salzburger W, Braasch I, Meyer A
BMC genomics720(2006 Feb)

The zebrafish gene map defines ancestral vertebrate chromosomes.
Woods IG, Wilson C, Friedlander B, Chang P, Reyes DK, Nix R, Kelly PD, Chu F, Postlethwait JH, Talbot WS
Genome research15(9)1307-14(2005 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following chmp2a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the chmp2a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa37729	NM_213517.1 Latest version!	Danio rerio charged multivesicular body protein 2A (chmp2a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

chmp2a ( NM_213517.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_998682.1 Danio rerio charged multivesicular body protein 2A (chmp2a), mRNA.

Price & Availability↑

CloneID	ODa37729
Clone ID Related Accession (Same CDS sequence)	NM_213517.1
Accession Version	NM_213517.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 663bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-01-26
Organism	Danio rerio(zebrafish)
Product	charged multivesicular body protein 2a
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC045320.1. On Jan 9, 2008 this sequence version replaced XM_001335419.1. ##Evidence-Data-START## Transcript exon combination :: BC045320.1, BC171414.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGAGTCCC TGTTTGGAAG GAGAAAGACT CCTGAGGAGA TGCTCAGACA GAATCAAAGA 
GCATTAAATA GAGCCATGCG GGATCTAGAC AGAGAACGGC AGAGACTGGA GCAGCAGGAA 
AAGAAAATAA TCGCAGACAT AAAAAAAATG GCCAAACAAG GACAGATGGA TGCTGTAAAG 
ATCATGGCTA AGGATTTGGT TCGTACAAGA CGATATGTTA AGAAGTTCAT CATGATGAGA 
GCCAATATTC AAGCTGTCAG CCTTAAAATT CAAACCCTCA AATCAAACAA CAGCATGGCG 
CAGGCCATGA AAGGAGTCAC CAAAGCTATG GCCACCATGA ACAGACAGTT AAAGTTGCCA 
CAGATCCAGA AGATCATGAT GGAGTTTGAG CGCCAAAGTG AAATCATGGA CATGAAGGAG 
GAGATGATGA ATGATGCAAT TGATGATGCG ATGGGAGATG AAGATGATGA AGAGGAGAGT 
GATGCTGTTG TTTCTCAAGT TCTTGATGAG CTGGGTCTGA CTCTGTCTGA TGAACTTTCA 
AACCTGCCTG CTACTGGAGG AAGTCTGTCG GTTGCTGCTG GGAAGAAAGC TGAGCCGCAG 
CCTACGCTGG CCGATGCTGA TGCTGACTTG GAAGAGAGAC TGAATAATCT CAGAAGAGAC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_998682.1
CDS	140..802
Translation	MESLFGRRKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLSDELSNLPATGGSLSVAAGKKAEPQPTLADADADLEERLNNLRRD

Target ORF information:

RefSeq Version	NM_213517.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio charged multivesicular body protein 2A (chmp2a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_213517.1

ORF Insert Sequence:

ATGGAGTCCC TGTTTGGAAG GAGAAAGACT CCTGAGGAGA TGCTCAGACA GAATCAAAGA 
GCATTAAATA GAGCCATGCG GGATCTAGAC AGAGAACGGC AGAGACTGGA GCAGCAGGAA 
AAGAAAATAA TCGCAGACAT AAAAAAAATG GCCAAACAAG GACAGATGGA TGCTGTAAAG 
ATCATGGCTA AGGATTTGGT TCGTACAAGA CGATATGTTA AGAAGTTCAT CATGATGAGA 
GCCAATATTC AAGCTGTCAG CCTTAAAATT CAAACCCTCA AATCAAACAA CAGCATGGCG 
CAGGCCATGA AAGGAGTCAC CAAAGCTATG GCCACCATGA ACAGACAGTT AAAGTTGCCA 
CAGATCCAGA AGATCATGAT GGAGTTTGAG CGCCAAAGTG AAATCATGGA CATGAAGGAG 
GAGATGATGA ATGATGCAAT TGATGATGCG ATGGGAGATG AAGATGATGA AGAGGAGAGT 
GATGCTGTTG TTTCTCAAGT TCTTGATGAG CTGGGTCTGA CTCTGTCTGA TGAACTTTCA 
AACCTGCCTG CTACTGGAGG AAGTCTGTCG GTTGCTGCTG GGAAGAAAGC TGAGCCGCAG 
CCTACGCTGG CCGATGCTGA TGCTGACTTG GAAGAGAGAC TGAATAATCT CAGAAGAGAC 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Tissue-restricted expression of Nrf2 and its target genes in zebrafish with gene-specific variations in the induction profiles.
PloS one6(10)e26884(2011)
Nakajima H,Nakajima-Takagi Y,Tsujita T,Akiyama S,Wakasa T,Mukaigasa K,Kaneko H,Tamaru Y,Yamamoto M,Kobayashi M

Many genes in fish have species-specific asymmetric rates of molecular evolution.
BMC genomics720(2006 Feb)
Steinke D,Salzburger W,Braasch I,Meyer A

The zebrafish gene map defines ancestral vertebrate chromosomes.
Genome research15(9)1307-14(2005 Sep)
Woods IG,Wilson C,Friedlander B,Chang P,Reyes DK,Nix R,Kelly PD,Chu F,Postlethwait JH,Talbot WS

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chmp2a cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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