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VPS2.1 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Summary

Gene Symbol VPS2.1
Entrez Gene ID 815211
Full Name SNF7 family protein
Synonyms T12H3.8,T12H3_8,VPS2
Gene Type protein-coding
Organism Arabidopsis thaliana(thale cress)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_126650.4 NP_565336.1 SNF7 family protein
NM_001335305.1 NP_001324346.1 SNF7 family protein

Pathways from BioSystems


Homologies


Xenopus tropicalis (tropical clawed frog) chmp2a NP_001005008.1
Homo sapiens (human) CHMP2A NP_940818.1
Canis lupus familiaris (dog) CHMP2A XP_850536.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP001285 XP_321862.3
Caenorhabditis elegans (roundworm) vps-2 NP_496717.1
Schizosaccharomyces pombe (fission yeast) did4 NP_593871.3
Oryza sativa (rice) Os07g0236800 NP_001059248.1
Bos taurus (cattle) CHMP2A NP_001029722.1
Mus musculus (house mouse) Chmp2a NP_081161.1
Rattus norvegicus (Norway rat) Chmp2a NP_001102376.1
Danio rerio (zebrafish) bc2 NP_998682.1
Neurospora crassa NCU00435 XP_956699.1
Pan troglodytes (chimpanzee) CHMP2A XP_003316813.1
CHMP2A XP_001099219.1
Gallus gallus (chicken) CHMP2A NP_001074361.1
Drosophila melanogaster (fruit fly) vps2 NP_651455.1
Magnaporthe oryzae (rice blast fungus) MGG_05208 XP_003712753.1
Saccharomyces cerevisiae (baker's yeast) DID4 NP_012924.2
Kluyveromyces lactis KLLA0B13343g XP_452125.1
Eremothecium gossypii AGOS_ABR002C NP_982948.1
Arabidopsis thaliana (thale cress) VPS2.1 NP_565336.1

Gene Ontology


Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, Koo HL, Moffat KS, Cronin LA, Shen M, Pai G, Van Aken S, Umayam L, Tallon LJ, Gill JE, Adams MD, Carrera AJ, Creasy TH, Goodman HM, Somerville CR, Copenhaver GP, Preuss D, Nierman WC, White O, Eisen JA, Salzberg SL, Fraser CM, Venter JC
Nature402(6763)761-8(1999 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following VPS2.1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS2.1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OAb06929 NM_126650.4
Latest version!		 Arabidopsis thaliana SNF7 family protein (VPS2.1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
OAb35580 NM_001335305.1
Latest version!		 Arabidopsis thaliana SNF7 family protein (VPS2.1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $174.30
$249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OAb06929
Clone ID Related Accession (Same CDS sequence) NM_126650.4
Accession Version NM_126650.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 678bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-13
Organism Arabidopsis thaliana(thale cress)
Product SNF7 family protein
Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_126650.3. 

1
61
121
181
241
301
361
421
481
541
601
661
ATGATGAATT CAATCTTCGG AAAGCGAAAA ACTCCCGCAG AACTTCTGCG GGAGAACAAG 
CGGATGCTGG ATAAGTCTAT CAGAGAGATA GAGAGGGAGA GACAAGGCCT ACAAACACAA 
GAAAAGAAAC TCATTAACGA GATTAAAAAG ACCGCAAAGC AAGGCCAAAT GGGAGCTGTT 
AAAGTGATGG CAAAGGATCT TATAAGAACG CGGCACCAGA TTGAGAAGTT TTACAAGCTT 
AAATCTCAAC TTCAAGGTGT ATCTCTCAGG ATCCAGACTC TGAAATCTAC ACAAGCGATG 
GGTGAGGCGA TGAAAGGTGT GACTAAAGCA ATGGGGCAAA TGAACAGGCA GATGAACCTT 
CCATCTCTGC AGAAAATCAT GCAAGAATTT GAGAGGCAGA ACGAGAAAAT GGAGATGGTG 
TCTGAGGTTA TGGGAGATGC TATTGATGAT GCTTTGGAAG GAGATGAGGA AGAAGAAGAG 
ACTGAAGATC TTGTTAGCCA AGTCCTTGAC GAGATCGGTA TCGACATCAA CCAAGAGCTG 
GTGAATGCTC CATCTGGTGC GGTCGCAGTA CCCGCAGCAA AGAACAAGGT GGTACAAGCT 
GAGGCGACCG GAGCTGAGGA CAGTGGAGGT ATAGATAGTG ACCTTCAAGC AAGGTTGGAT 
AACCTTAGAA AAATGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_565336.1
CDS247..924
Translation

Target ORF information:

RefSeq Version NM_126650.4
Organism Arabidopsis thaliana(thale cress)
Definition Arabidopsis thaliana SNF7 family protein (VPS2.1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_126650.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
ATGATGAATT CAATCTTCGG AAAGCGAAAA ACTCCCGCAG AACTTCTGCG GGAGAACAAG 
CGGATGCTGG ATAAGTCTAT CAGAGAGATA GAGAGGGAGA GACAAGGCCT ACAAACACAA 
GAAAAGAAAC TCATTAACGA GATTAAAAAG ACCGCAAAGC AAGGCCAAAT GGGAGCTGTT 
AAAGTGATGG CAAAGGATCT TATAAGAACG CGGCACCAGA TTGAGAAGTT TTACAAGCTT 
AAATCTCAAC TTCAAGGTGT ATCTCTCAGG ATCCAGACTC TGAAATCTAC ACAAGCGATG 
GGTGAGGCGA TGAAAGGTGT GACTAAAGCA ATGGGGCAAA TGAACAGGCA GATGAACCTT 
CCATCTCTGC AGAAAATCAT GCAAGAATTT GAGAGGCAGA ACGAGAAAAT GGAGATGGTG 
TCTGAGGTTA TGGGAGATGC TATTGATGAT GCTTTGGAAG GAGATGAGGA AGAAGAAGAG 
ACTGAAGATC TTGTTAGCCA AGTCCTTGAC GAGATCGGTA TCGACATCAA CCAAGAGCTG 
GTGAATGCTC CATCTGGTGC GGTCGCAGTA CCCGCAGCAA AGAACAAGGT GGTACAAGCT 
GAGGCGACCG GAGCTGAGGA CAGTGGAGGT ATAGATAGTG ACCTTCAAGC AAGGTTGGAT 
AACCTTAGAA AAATGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OAb35580
Clone ID Related Accession (Same CDS sequence) NM_001335305.1
Accession Version NM_001335305.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 615bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-02-13
Organism Arabidopsis thaliana(thale cress)
Product SNF7 family protein
Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). 

1
61
121
181
241
301
361
421
481
541
601
ATGCTGGATA AGTCTATCAG AGAGATAGAG AGGGAGAGAC AAGGCCTACA AACACAAGAA 
AAGAAACTCA TTAACGAGAT TAAAAAGACC GCAAAGCAAG GCCAAATGGG AGCTGTTAAA 
GTGATGGCAA AGGATCTTAT AAGAACGCGG CACCAGATTG AGAAGTTTTA CAAGCTTAAA 
TCTCAACTTC AAGGTGTATC TCTCAGGATC CAGACTCTGA AATCTACACA AGCGATGGGT 
GAGGCGATGA AAGGTGTGAC TAAAGCAATG GGGCAAATGA ACAGGCAGAT GAACCTTCCA 
TCTCTGCAGA AAATCATGCA AGAATTTGAG AGGCAGAACG AGAAAATGGA GATGGTGTCT 
GAGGTTATGG GAGATGCTAT TGATGATGCT TTGGAAGGAG ATGAGGAAGA AGAAGAGACT 
GAAGATCTTG TTAGCCAAGT CCTTGACGAG ATCGGTATCG ACATCAACCA AGAGCTGGTG 
AATGCTCCAT CTGGTGCGGT CGCAGTACCC GCAGCAAAGA ACAAGGTGGT ACAAGCTGAG 
GCGACCGGAG CTGAGGACAG TGGAGGTATA GATAGTGACC TTCAAGCAAG GTTGGATAAC 
CTTAGAAAAA TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001324346.1
CDS481..1095
Translation

Target ORF information:

RefSeq Version NM_001335305.1
Organism Arabidopsis thaliana(thale cress)
Definition Arabidopsis thaliana SNF7 family protein (VPS2.1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001335305.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
ATGCTGGATA AGTCTATCAG AGAGATAGAG AGGGAGAGAC AAGGCCTACA AACACAAGAA 
AAGAAACTCA TTAACGAGAT TAAAAAGACC GCAAAGCAAG GCCAAATGGG AGCTGTTAAA 
GTGATGGCAA AGGATCTTAT AAGAACGCGG CACCAGATTG AGAAGTTTTA CAAGCTTAAA 
TCTCAACTTC AAGGTGTATC TCTCAGGATC CAGACTCTGA AATCTACACA AGCGATGGGT 
GAGGCGATGA AAGGTGTGAC TAAAGCAATG GGGCAAATGA ACAGGCAGAT GAACCTTCCA 
TCTCTGCAGA AAATCATGCA AGAATTTGAG AGGCAGAACG AGAAAATGGA GATGGTGTCT 
GAGGTTATGG GAGATGCTAT TGATGATGCT TTGGAAGGAG ATGAGGAAGA AGAAGAGACT 
GAAGATCTTG TTAGCCAAGT CCTTGACGAG ATCGGTATCG ACATCAACCA AGAGCTGGTG 
AATGCTCCAT CTGGTGCGGT CGCAGTACCC GCAGCAAAGA ACAAGGTGGT ACAAGCTGAG 
GCGACCGGAG CTGAGGACAG TGGAGGTATA GATAGTGACC TTCAAGCAAG GTTGGATAAC 
CTTAGAAAAA TGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Nature402(6763)761-8(1999 Dec)
Lin X,Kaul S,Rounsley S,Shea TP,Benito MI,Town CD,Fujii CY,Mason T,Bowman CL,Barnstead M,Feldblyum TV,Buell CR,Ketchum KA,Lee J,Ronning CM,Koo HL,Moffat KS,Cronin LA,Shen M,Pai G,Van Aken S,Umayam L,Tallon LJ,Gill JE,Adams MD,Carrera AJ,Creasy TH,Goodman HM,Somerville CR,Copenhaver GP,Preuss D,Nierman WC,White O,Eisen JA,Salzberg SL,Fraser CM,Venter JC