Gene Symbol | Xkr6 |
Entrez Gene ID | 219149 |
Full Name | X-linked Kx blood group related 6 |
Synonyms | 2700008G24Rik,BC024502,Xrg6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Xkr6 cDNA ORF clone
Gene Symbol | Xkr6 |
Entrez Gene ID | 219149 |
Full Name | X-linked Kx blood group related 6 |
Synonyms | 2700008G24Rik,BC024502,Xrg6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006518881.4 | XP_006518944.1 | XK-related protein 6 isoform X3 |
XM_017315977.2 | XP_017171466.1 | XK-related protein 6 isoform X1 |
XM_006518880.3 | XP_006518943.1 | XK-related protein 6 isoform X2 |
NM_173393.2 | NP_775569.2 | XK-related protein 6 |
XM_006518881.3 | XP_006518944.1 | XK-related protein 6 isoform X3 |
XM_006518880.4 | XP_006518943.1 | XK-related protein 6 isoform X2 |
XM_017315977.1 | XP_017171466.1 | XK-related protein 6 isoform X1 |
Pan troglodytes (chimpanzee) | XKR6 | XP_003954568.1 |
Canis lupus familiaris (dog) | XKR6 | XP_005635712.1 |
Bos taurus (cattle) | XKR6 | NP_001179260.1 |
Danio rerio (zebrafish) | xkr6 | NP_001012257.1 |
Drosophila melanogaster (fruit fly) | CG32579 | NP_001259606.1 |
Xenopus tropicalis (tropical clawed frog) | xkr6 | NP_001029115.1 |
Homo sapiens (human) | XKR6 | NP_775954.2 |
XKR6 | XP_001089696.2 | |
Rattus norvegicus (Norway rat) | Xkr6 | NP_001012042.1 |
Gallus gallus (chicken) | XKR6 | XP_420037.3 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000599 | XP_310478.3 |
Mus musculus (house mouse) | Xkr6 | NP_775569.2 |
Caenorhabditis elegans (roundworm) | ced-8 | NP_509427.2 |
Viral Infection-Induced Differential Expression of LncRNAs Associated with Collagen in Mouse Placentas and Amniotic Sacs.
Pan J, Mor G, Ju W, Zhong J, Luo X, Aldo PB, Zhong M, Yu Y, Jenkins EC, Brown WT, Zhong N
American journal of reproductive immunology (New York, N.Y. : 1989)74(3)237-57(2015 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Xkr6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Xkr6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu49896 | |
Clone ID Related Accession (Same CDS sequence) | XM_006518880.3 , XM_006518880.4 | |
Accession Version | XM_006518880.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1236bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | XK-related protein 6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000080.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006518880.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCAGG ATCCCAAGAA TGCGCGGAGG CAGCGGCACC GCACACCTGC AGCTCCAACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006518943.1 |
CDS | 887..2122 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006518880.3 |
1 | ATGGAGCAGG ATCCCAAGAA TGCGCGGAGG CAGCGGCACC GCACACCTGC AGCTCCAACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu49897 | |
Clone ID Related Accession (Same CDS sequence) | XM_006518881.4 , XM_006518881.3 | |
Accession Version | XM_006518881.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | XK-related protein 6 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000080.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006518881.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACCTGG GGATTCAGAG CCAGCGGCAG AAGGAACACC AGCGGCGCTT CTACTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006518944.1 |
CDS | 1972..3120 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006518881.3 |
1 | ATGTACCTGG GGATTCAGAG CCAGCGGCAG AAGGAACACC AGCGGCGCTT CTACTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu49896 | |
Clone ID Related Accession (Same CDS sequence) | XM_006518880.3 , XM_006518880.4 | |
Accession Version | XM_006518880.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1236bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | XK-related protein 6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000080.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006518880.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCAGG ATCCCAAGAA TGCGCGGAGG CAGCGGCACC GCACACCTGC AGCTCCAACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006518943.1 |
CDS | 5785..7020 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006518880.4 |
1 | ATGGAGCAGG ATCCCAAGAA TGCGCGGAGG CAGCGGCACC GCACACCTGC AGCTCCAACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu49897 | |
Clone ID Related Accession (Same CDS sequence) | XM_006518881.4 , XM_006518881.3 | |
Accession Version | XM_006518881.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | XK-related protein 6 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000080.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006518881.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTACCTGG GGATTCAGAG CCAGCGGCAG AAGGAACACC AGCGGCGCTT CTACTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006518944.1 |
CDS | 10589..11737 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006518881.4 |
1 | ATGTACCTGG GGATTCAGAG CCAGCGGCAG AAGGAACACC AGCGGCGCTT CTACTGGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu78736 | |
Clone ID Related Accession (Same CDS sequence) | XM_017315977.2 , XM_017315977.1 | |
Accession Version | XM_017315977.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1266bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | XK-related protein 6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000080.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017315977.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTCAGC ACCGAGGCTG CGGTGATGGA GCAGGATCCC AAGAATGCGC GGAGGCAGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017171466.1 |
CDS | 5760..7025 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017315977.2 |
1 | ATGGGTCAGC ACCGAGGCTG CGGTGATGGA GCAGGATCCC AAGAATGCGC GGAGGCAGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu78736 | |
Clone ID Related Accession (Same CDS sequence) | XM_017315977.2 , XM_017315977.1 | |
Accession Version | XM_017315977.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1266bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | XK-related protein 6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000080.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTCAGC ACCGAGGCTG CGGTGATGGA GCAGGATCCC AAGAATGCGC GGAGGCAGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017171466.1 |
CDS | 863..2128 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017315977.1 |
1 | ATGGGTCAGC ACCGAGGCTG CGGTGATGGA GCAGGATCCC AAGAATGCGC GGAGGCAGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04552 | |
Clone ID Related Accession (Same CDS sequence) | NM_173393.2 | |
Accession Version | NM_173393.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1917bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-21 | |
Organism | Mus musculus(house mouse) | |
Product | XK-related protein 6 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC120788.7, AY534252.1 and AC118607.12. On Apr 27, 2010 this sequence version replaced NM_173393.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on homologous transcript alignments. CCDS Note: The N-terminus' coding region has been updated based on partial mouse mRNA AY534252.1, and extended based on aligning homologous mRNAs, including human AY534244.1 and rat AY534260.1. The new extended N-terminus is well-conserved and is supported by homologous proteins, including human NP_775954.2 (CCDS5978.2), rat NP_001012042.1, X. tropicalis NP_001029115.1, zebrafish NP_001012257.1, and Fugu NP_001027884.1. There is a lack of mouse transcript support for this new extended 5' end. ##Evidence-Data-START## Transcript exon combination :: AY534252.1, SRR1660813.213760.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849379 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGCGA AATCCGATGG CGGTGGCGTG GGGGTGGGCT TCGCCCAGCT GCACAACCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_775569.2 |
CDS | 1..1917 |
Translation |
Target ORF information:
Target ORF information:
|
NM_173393.2 |
1 | ATGGCGGCGA AATCCGATGG CGGTGGCGTG GGGGTGGGCT TCGCCCAGCT GCACAACCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Viral Infection-Induced Differential Expression of LncRNAs Associated with Collagen in Mouse Placentas and Amniotic Sacs. |