Gene Symbol | SMYD2 |
Entrez Gene ID | 226830 |
Full Name | SET and MYND domain containing 2 |
Synonyms | 1110020E07Rik,4930402C15,KMT3C,Zmynd14 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
ORF » Species Summary » Mus musculus » SMYD2 cDNA ORF clone
gRNAs
Gene Symbol | SMYD2 |
Entrez Gene ID | 226830 |
Full Name | SET and MYND domain containing 2 |
Synonyms | 1110020E07Rik,4930402C15,KMT3C,Zmynd14 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006497146.4 | XP_006497209.1 | N-lysine methyltransferase SMYD2 isoform X1 |
XM_006497146.3 | XP_006497209.1 | N-lysine methyltransferase SMYD2 isoform X1 |
XM_006497147.3 | XP_006497210.1 | N-lysine methyltransferase SMYD2 isoform X2 |
XM_006497147.4 | XP_006497210.1 | N-lysine methyltransferase SMYD2 isoform X2 |
NM_026796.2 | NP_081072.1 | N-lysine methyltransferase SMYD2 |
XM_017320186.1 | XP_017175675.1 | N-lysine methyltransferase SMYD2 isoform X3 |
NM_026796.1 | NP_081072.1 | N-lysine methyltransferase SMYD2 |
Canis lupus familiaris (dog) | SMYD2 | XP_537149.3 |
Xenopus tropicalis (tropical clawed frog) | LOC100495522 | XP_002934751.2 |
Homo sapiens (human) | SMYD2 | NP_064582.2 |
Rattus norvegicus (Norway rat) | Smyd2 | NP_996733.1 |
Danio rerio (zebrafish) | smyd2a | NP_001013568.1 |
Pan troglodytes (chimpanzee) | SMYD2 | XP_003308794.1 |
SMYD2 | XP_001106482.2 | |
Bos taurus (cattle) | SMYD2 | NP_001069832.1 |
Mus musculus (house mouse) | Smyd2 | NP_081072.1 |
Gallus gallus (chicken) | SMYD2 | NP_001264500.1 |
Lysine methyltransferase SMYD2 promotes cyst growth in autosomal dominant polycystic kidney disease.
Li LX, Fan LX, Zhou JX, Grantham JJ, Calvet JP, Sage J, Li X
The Journal of clinical investigation127(7)2751-2764(2017 Jun)
Smyd2 is a Myc-regulated gene critical for MLL-AF9 induced leukemogenesis.
Bagislar S, Sab? A, Kress TR, Doni M, Nicoli P, Campaner S, Amati B
Oncotarget7(41)66398-66415(2016 Oct)
Coordination of stress signals by the lysine methyltransferase SMYD2 promotes pancreatic cancer.
Reynoird N, Mazur PK, Stellfeld T, Flores NM, Lofgren SM, Carlson SM, Brambilla E, Hainaut P, Kaznowska EB, Arrowsmith CH, Khatri P, Stresemann C, Gozani O, Sage J
Genes & development30(7)772-85(2016 Apr)
The histone methyltransferase Smyd2 is a negative regulator of macrophage activation by suppressing interleukin 6 (IL-6) and tumor necrosis factor ? (TNF-?) production.
Xu G, Liu G, Xiong S, Liu H, Chen X, Zheng B
The Journal of biological chemistry290(9)5414-23(2015 Feb)
Lysine methyltransferase Smyd2 suppresses p53-dependent cardiomyocyte apoptosis.
Sajjad A, Novoyatleva T, Vergarajauregui S, Troidl C, Schermuly RT, Tucker HO, Engel FB
Biochimica et biophysica acta1843(11)2556-62(2014 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
two positive feedback loops that integrate epigenetic regulation and renal inflammation in cyst development: SMYD2/IL-6/STAT3/SMYD2 and SMYD2/TNF-alpha/NF-kappaB/SMYD2.
Title: Lysine methyltransferase SMYD2 promotes cyst growth in autosomal dominant polycystic kidney disease.
a pivotal role for SMYD2 in promoting pancreatic cancer.
Title: Coordination of stress signals by the lysine methyltransferase SMYD2 promotes pancreatic cancer.
Data show that histone methyltransferase Smyd2 inhibits macrophage interleukin 6 (IL-6) and tumor necrosis factor alpha (TNF-alpha) production. production.
Title: The histone methyltransferase Smyd2 is a negative regulator of macrophage activation by suppressing interleukin 6 (IL-6) and tumor necrosis factor ? (TNF-?) production.
Smyd2 is a lysine methyltransferase which has, next to its nuclear activity, specific regulatory functions in the cytoplasm of heart and skeletal muscle cells.
Title: Lysine methyltransferase Smyd2 regulates Hsp90-mediated protection of the sarcomeric titin springs and cardiac function.
Smyd2, similar to Smyd3, interacts with RNA Polymerase II as well as to the RNA helicase, HELZ
Title: Cardiac deletion of Smyd2 is dispensable for mouse heart development.
The following SMYD2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SMYD2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu73312 | |
Clone ID Related Accession (Same CDS sequence) | XM_017320186.1 | |
Accession Version | XM_017320186.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 690bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | N-lysine methyltransferase SMYD2 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000067.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATCACA GCTGCTGCCC GAATGTCATT GTGACCTACA AAGGGACCCT GGCAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017175675.1 |
CDS | 483..1172 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAATCACA GCTGCTGCCC GAATGTCATT GTGACCTACA AAGGGACCCT GGCAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu28949 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497146.4 , XM_006497146.3 | |
Accession Version | XM_006497146.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1191bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | N-lysine methyltransferase SMYD2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000067.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006497146.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006497209.1 |
CDS | 97..1287 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu28950 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497147.3 , XM_006497147.4 | |
Accession Version | XM_006497147.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 720bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | N-lysine methyltransferase SMYD2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000067.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006497147.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006497210.1 |
CDS | 98..817 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03046 | |
Clone ID Related Accession (Same CDS sequence) | NM_026796.2 , NM_026796.1 | |
Accession Version | NM_026796.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1302bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-26 | |
Organism | Mus musculus(house mouse) | |
Product | N-lysine methyltransferase SMYD2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC140250.3, AK150857.1, AK003853.1 and W76826.1. On Sep 8, 2017 this sequence version replaced NM_026796.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC023119.1, AK150857.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164138, SAMN01164139 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_081072.1 |
CDS | 13..1314 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu03046 | |
Clone ID Related Accession (Same CDS sequence) | NM_026796.2 , NM_026796.1 | |
Accession Version | NM_026796.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1302bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-05 | |
Organism | Mus musculus(House mouse) | |
Product | N-lysine methyltransferase SMYD2 | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC023119.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC023119.1, AK150857.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164138, SAMN01164139 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_081072.1 |
CDS | 10..1311 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu28949 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497146.4 , XM_006497146.3 | |
Accession Version | XM_006497146.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1191bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | N-lysine methyltransferase SMYD2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000067.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006497146.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006497209.1 |
CDS | 193..1383 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu28950 | |
Clone ID Related Accession (Same CDS sequence) | XM_006497147.3 , XM_006497147.4 | |
Accession Version | XM_006497147.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 720bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | N-lysine methyltransferase SMYD2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000067.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006497147.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006497210.1 |
CDS | 217..936 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGCGCCG AGGCCCGCGG CGGCCTGGAG CGCTTCTGCA GTGCGGGCAA GGGCCGGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Lysine methyltransferase SMYD2 promotes cyst growth in autosomal dominant polycystic kidney disease. |
Smyd2 is a Myc-regulated gene critical for MLL-AF9 induced leukemogenesis. |
Coordination of stress signals by the lysine methyltransferase SMYD2 promotes pancreatic cancer. |
The histone methyltransferase Smyd2 is a negative regulator of macrophage activation by suppressing interleukin 6 (IL-6) and tumor necrosis factor ? (TNF-?) production. |
Lysine methyltransferase Smyd2 suppresses p53-dependent cardiomyocyte apoptosis. |