Gene Symbol | WDR48 |
Entrez Gene ID | 460277 |
Full Name | WD repeat domain 48 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » WDR48 cDNA ORF clone
gRNAs
Gene Symbol | WDR48 |
Entrez Gene ID | 460277 |
Full Name | WD repeat domain 48 |
General protein information |
|
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
NM_001280519.1 | NP_001267448.1 | WD repeat-containing protein 48 |
XM_016939885.1 | XP_016795374.1 | WD repeat-containing protein 48 isoform X1 |
XM_024355199.1 | XP_024210967.1 | WD repeat-containing protein 48 isoform X2 |
XM_016939885.2 | XP_016795374.1 | WD repeat-containing protein 48 isoform X1 |
Homo sapiens (human) | WDR48 | NP_065890.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001361 | XP_321784.3 |
Bos taurus (cattle) | WDR48 | NP_001069992.1 |
Mus musculus (house mouse) | Wdr48 | NP_080512.1 |
Drosophila melanogaster (fruit fly) | CG9062 | NP_001260886.1 |
WDR48 | XP_001083670.2 | |
Gallus gallus (chicken) | WDR48 | NP_001026135.1 |
Caenorhabditis elegans (roundworm) | F35G12.4 | NP_497930.2 |
Xenopus tropicalis (tropical clawed frog) | wdr48 | NP_001072858.1 |
Pan troglodytes (chimpanzee) | WDR48 | XP_516374.3 |
Canis lupus familiaris (dog) | WDR48 | XP_860103.1 |
Rattus norvegicus (Norway rat) | Wdr48 | NP_001129367.1 |
Danio rerio (zebrafish) | wdr48 | NP_999874.1 |
Arabidopsis thaliana (thale cress) | LRS1 | NP_850516.1 |
Oryza sativa (rice) | Os12g0165000 | NP_001066238.1 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following WDR48 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the WDR48 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00525 | |
Clone ID Related Accession (Same CDS sequence) | NM_001280519.1 | |
Accession Version | NM_001280519.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2034bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-20 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | WD repeat-containing protein 48 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK306212.1. On or before Jul 22, 2013 this sequence version replaced XM_516374.3, XM_003309702.1, XM_003309703.1. ##Evidence-Data-START## Transcript exon combination :: AK306212.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGCCC ATCACCGGCA GAACACAGCA GGGCGGAGGA AAGTGCAGGT TTCCTATGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001267448.1 |
CDS | 31..2064 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGCCC ATCACCGGCA GAACACAGCA GGGCGGAGGA AAGTGCAGGT TTCCTATGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc104420 | |
Clone ID Related Accession (Same CDS sequence) | XM_016939885.2 | |
Accession Version | XM_016939885.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1824bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | WD repeat-containing protein 48 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036882.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016939885.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAACACC ATACTGATTG GGTAAACGAC ATTGTACTCT GTTGTAATGG GAAAACATTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016795374.1 |
CDS | 525..2348 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAACACC ATACTGATTG GGTAAACGAC ATTGTACTCT GTTGTAATGG GAAAACATTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc104421 | |
Clone ID Related Accession (Same CDS sequence) | XM_024355199.1 | |
Accession Version | XM_024355199.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2148bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | WD repeat-containing protein 48 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036882.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCCC ATCACCGGCA GAACACAGCA GGGCGGAGGA AAGTGCAGGT TTCCTATGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024210967.1 |
CDS | 52..2199 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGCCC ATCACCGGCA GAACACAGCA GGGCGGAGGA AAGTGCAGGT TTCCTATGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc81079 | |
Clone ID Related Accession (Same CDS sequence) | XM_016939885.1 | |
Accession Version | XM_016939885.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1824bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | WD repeat-containing protein 48 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006490.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAACACC ATACTGATTG GGTAAACGAC ATTGTACTCT GTTGTAATGG GAAAACATTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016795374.1 |
CDS | 525..2348 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAACACC ATACTGATTG GGTAAACGAC ATTGTACTCT GTTGTAATGG GAAAACATTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Major chimpanzee-specific structural changes in sperm development-associated genes. |