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LOC100498084 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Summary

Gene Symbol LOC100498084
Entrez Gene ID 100498084
Full Name cathepsin S-like
Gene Type protein-coding
Organism Xenopus tropicalis(tropical clawed frog)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_018096476.1 XP_017951965.1 cathepsin S-like
XM_031891632.1 XP_031747492.1 cathepsin S

Pathways from BioSystems


Homologies


Oryza sativa (rice) Os09g0497500 NP_001063560.1
Xenopus tropicalis (tropical clawed frog) LOC100492634 XP_002943461.2
Xenopus tropicalis (tropical clawed frog) LOC100494325 XP_002934126.2
Xenopus tropicalis (tropical clawed frog) LOC100498238 XP_002943590.2
Arabidopsis thaliana (thale cress) AT1G06260 NP_563764.1
Xenopus tropicalis (tropical clawed frog) LOC594890 NP_001076821.2
Xenopus tropicalis (tropical clawed frog) LOC100494590 XP_002944712.2
Xenopus tropicalis (tropical clawed frog) LOC101731810 XP_004917668.1
Xenopus tropicalis (tropical clawed frog) LOC100490537 XP_002934107.1
Xenopus tropicalis (tropical clawed frog) LOC100490361 XP_002934106.1
Xenopus tropicalis (tropical clawed frog) LOC100498084 XP_002943589.2
Xenopus tropicalis (tropical clawed frog) ctss.2 NP_001011214.1
Xenopus tropicalis (tropical clawed frog) LOC100124852 NP_001096284.1

Gene Ontology

The following LOC100498084 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100498084 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa46187 XM_018096476.1
Latest version!		 Xenopus tropicalis cathepsin S-like (LOC100498084), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $258.30
$369.00
OXa64958 XM_031891632.1
Latest version!		 Xenopus tropicalis cathepsin S (LOC100498084), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $223.30
$319.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OXa46187
Clone ID Related Accession (Same CDS sequence) XM_018096476.1
Accession Version XM_018096476.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1008bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-09-07
Organism Xenopus tropicalis(tropical clawed frog)
Product cathepsin S-like
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGGACCAT CCAGCATCTG CCTTGTGGCT CTGCTTTCCC TACTGATCCC GGCTCACTCG 
GCCCCTGATC CCACCCTGGA CACTCACTGG CAGCTGTGGG TTAAAACTCA CCAGAAGAGC 
TATAAGGATG GGGAAGAGGA ACGTGCAAGA CGAACCATCT GGGAGGAGAC ACTGAAATTT 
ATCTCAGTCC ATAACTTGGA ATATTCCTTG GGACTCCACA CTTATGAGGT TGGGATGAAC 
CATCTGGGAG ATATGGTAAG TGAGGAGGTG GCTGCAACAA TGACAGGTTA CACCGGCTCA 
GGGGATTCAT TGGCCAACAT GTCCCACGTA CCCAAAGAGA TACTAGAGGC TCTGGCACCA 
CCATCAATAG ACTGGAGAAC CCAAAACTGT GTCACCCCTG TGAGAGATCA GGGATCATTC 
TGCAGATCTT GCTATGCTTT CAGTGCTGTG GGGGCCCTGG AATGCCAATG GAAAAAGAAA 
ACTGTCAGAC TGGTCACATT CAGCCCCCAG GAACTGGTGG ATTGTTCCGA CGGCGAAGGA 
AACCATGGCT GTAACGGGGG AAAAATCGAA AAGGCCTTTA AATACATGAA GAAATATGGC 
GTTATGGAGG AATCTGCTTA CCCATATACA GGACAGAAAG GACTGTGCAG AAAGAAGCAG 
CCAGGCAATA TTGGAGTAGT AAAGGCAATC CACGATTTGC CTTCTGGCAA TGAAACTTTA 
CTTATGAATA CTGTGGGAAC AATTGGACCC GTGTCTGTTT CCATTAATGC TTCCAGTGAA 
AAATTCCATC AGTTCAAGTC AGGTGTCTAT TACAATCCAG ACTGCCTCCC CAACAAAGTA 
AACCATGCTG TGCTTGTGGT TGGATACGGT AAAGAAAATG GCATGGACTA TTGGCTGGTT 
AAGAACAGCT GGGGAGTCCA GTTTGGAGAG AATGGATACA TTAAAATGGC TCGAAATCGT 
GGCAACAACT GTGGCATTGC GACGAGACCC GTCTATGCAA CTGTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017951965.1
CDS142..1149
Translation

Target ORF information:

RefSeq Version XM_018096476.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis cathepsin S-like (LOC100498084), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_018096476.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGGACCAT CCAGCATCTG CCTTGTGGCT CTGCTTTCCC TACTGATCCC GGCTCACTCG 
GCCCCTGATC CCACCCTGGA CACTCACTGG CAGCTGTGGG TTAAAACTCA CCAGAAGAGC 
TATAAGGATG GGGAAGAGGA ACGTGCAAGA CGAACCATCT GGGAGGAGAC ACTGAAATTT 
ATCTCAGTCC ATAACTTGGA ATATTCCTTG GGACTCCACA CTTATGAGGT TGGGATGAAC 
CATCTGGGAG ATATGGTAAG TGAGGAGGTG GCTGCAACAA TGACAGGTTA CACCGGCTCA 
GGGGATTCAT TGGCCAACAT GTCCCACGTA CCCAAAGAGA TACTAGAGGC TCTGGCACCA 
CCATCAATAG ACTGGAGAAC CCAAAACTGT GTCACCCCTG TGAGAGATCA GGGATCATTC 
TGCAGATCTT GCTATGCTTT CAGTGCTGTG GGGGCCCTGG AATGCCAATG GAAAAAGAAA 
ACTGTCAGAC TGGTCACATT CAGCCCCCAG GAACTGGTGG ATTGTTCCGA CGGCGAAGGA 
AACCATGGCT GTAACGGGGG AAAAATCGAA AAGGCCTTTA AATACATGAA GAAATATGGC 
GTTATGGAGG AATCTGCTTA CCCATATACA GGACAGAAAG GACTGTGCAG AAAGAAGCAG 
CCAGGCAATA TTGGAGTAGT AAAGGCAATC CACGATTTGC CTTCTGGCAA TGAAACTTTA 
CTTATGAATA CTGTGGGAAC AATTGGACCC GTGTCTGTTT CCATTAATGC TTCCAGTGAA 
AAATTCCATC AGTTCAAGTC AGGTGTCTAT TACAATCCAG ACTGCCTCCC CAACAAAGTA 
AACCATGCTG TGCTTGTGGT TGGATACGGT AAAGAAAATG GCATGGACTA TTGGCTGGTT 
AAGAACAGCT GGGGAGTCCA GTTTGGAGAG AATGGATACA TTAAAATGGC TCGAAATCGT 
GGCAACAACT GTGGCATTGC GACGAGACCC GTCTATGCAA CTGTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OXa64958
Clone ID Related Accession (Same CDS sequence) XM_031891632.1
Accession Version XM_031891632.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1008bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-17
Organism Xenopus tropicalis(tropical clawed frog)
Product cathepsin S
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGGACCAT CCAGCATCTG CCTTGTGGCT CTGCTTTCCC TACTGATCCC GGCTCACTCG 
GCCCCTGATC CCACCCTGGA CACTCACTGG CAGCTGTGGG TTAAAACTCA CCAGAAGAGC 
TATAAGGATG GGGAAGAGGA ACGTGCAAGA CGAACCATCT GGGAGGAGAC ACTGAAATTT 
ATCTCAGTCC ATAACTTGGA ATATTCCTTG GGACTTCACA CTTATGAGGT TGGGATGAAC 
CATCTGGGAG ATATGACAGG TGAGGAGGTG GCTGCAACAA TGACAGGTTA CACCGGCTCA 
GGGGATTCAT TGGCCAACAT GTCCCACGTA CCCAAAGAGA TACTAGAGGC TCTGGCACCA 
CCATCAATAG ACTGGAGAAC CCAAAACTGT GTCACCCCTG TGAGAGATCA GGGATCATCC 
TGCAGATCTT GCTATGCTTT CAGTGCCGTG GGGGCCCTGG AATGCCAATG GAAAAAGAAA 
ACTGTCAGAC TGGTCACATT CAGCCCCCAG GAACTGGTGG ATTGTTCCGA CGGCGAAGGA 
AACCATGGCT GTAACGGGGG AAAAATCGAA AAGGCCTTTA AATACATGAA GAAATATGGC 
GTTATGGAGG AATCTGCTTA CCCATATACA GGACAGAAAG GACTGTGCAG AAAGAAGCAG 
CCAGGCAATA TTGGAGTAGT AAAGGCAATC CACGATTTGC CTTCTGGCAA TGAAACTTTA 
CTTATGAATA CTGTGGGAAC AATTGGACCC GTGTCTGTTT CCATTAATGC TTCCAGTGAA 
AAATTCCATC AGTTCAAGTC AGGTGTCTAT TACAATCCAG ACTGCCTCCC CAACAAAGTA 
AACCATGCTG TGCTTGTGGT TGGATACGGT AAAGAAAATG GCATGGACTA TTGGCTGGTT 
AAGAACAGCT GGGGAGTCCA GTTTGGAGAG AATGGATACA TTAAAATGGC TCGAAATCGT 
GGCAACAACT GTGGCATTGC GACGAGACCC GTCTATGCAA CTGTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_031747492.1
CDS155..1162
Translation

Target ORF information:

RefSeq Version XM_031891632.1
Organism Xenopus tropicalis(tropical clawed frog)
Definition Xenopus tropicalis cathepsin S (LOC100498084), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_031891632.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGGACCAT CCAGCATCTG CCTTGTGGCT CTGCTTTCCC TACTGATCCC GGCTCACTCG 
GCCCCTGATC CCACCCTGGA CACTCACTGG CAGCTGTGGG TTAAAACTCA CCAGAAGAGC 
TATAAGGATG GGGAAGAGGA ACGTGCAAGA CGAACCATCT GGGAGGAGAC ACTGAAATTT 
ATCTCAGTCC ATAACTTGGA ATATTCCTTG GGACTTCACA CTTATGAGGT TGGGATGAAC 
CATCTGGGAG ATATGACAGG TGAGGAGGTG GCTGCAACAA TGACAGGTTA CACCGGCTCA 
GGGGATTCAT TGGCCAACAT GTCCCACGTA CCCAAAGAGA TACTAGAGGC TCTGGCACCA 
CCATCAATAG ACTGGAGAAC CCAAAACTGT GTCACCCCTG TGAGAGATCA GGGATCATCC 
TGCAGATCTT GCTATGCTTT CAGTGCCGTG GGGGCCCTGG AATGCCAATG GAAAAAGAAA 
ACTGTCAGAC TGGTCACATT CAGCCCCCAG GAACTGGTGG ATTGTTCCGA CGGCGAAGGA 
AACCATGGCT GTAACGGGGG AAAAATCGAA AAGGCCTTTA AATACATGAA GAAATATGGC 
GTTATGGAGG AATCTGCTTA CCCATATACA GGACAGAAAG GACTGTGCAG AAAGAAGCAG 
CCAGGCAATA TTGGAGTAGT AAAGGCAATC CACGATTTGC CTTCTGGCAA TGAAACTTTA 
CTTATGAATA CTGTGGGAAC AATTGGACCC GTGTCTGTTT CCATTAATGC TTCCAGTGAA 
AAATTCCATC AGTTCAAGTC AGGTGTCTAT TACAATCCAG ACTGCCTCCC CAACAAAGTA 
AACCATGCTG TGCTTGTGGT TGGATACGGT AAAGAAAATG GCATGGACTA TTGGCTGGTT 
AAGAACAGCT GGGGAGTCCA GTTTGGAGAG AATGGATACA TTAAAATGGC TCGAAATCGT 
GGCAACAACT GTGGCATTGC GACGAGACCC GTCTATGCAA CTGTGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed