Gene Symbol | TSR1 |
Entrez Gene ID | 55720 |
Full Name | TSR1, ribosome maturation factor |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » TSR1 cDNA ORF clone
Gene Symbol | TSR1 |
Entrez Gene ID | 55720 |
Full Name | TSR1, ribosome maturation factor |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
NM_018128.4 | NP_060598.3 | pre-rRNA-processing protein TSR1 homolog |
NM_018128.5 | NP_060598.3 | pre-rRNA-processing protein TSR1 homolog |
Homo sapiens (human) | TSR1 | NP_060598.3 |
Rattus norvegicus (Norway rat) | Tsr1 | XP_002727820.1 |
Saccharomyces cerevisiae (baker's yeast) | TSR1 | NP_010223.1 |
Schizosaccharomyces pombe (fission yeast) | SPAC23H4.15 | NP_593391.1 |
Canis lupus familiaris (dog) | LOC610048 | XP_852531.1 |
Mus musculus (house mouse) | Tsr1 | NP_796299.2 |
Caenorhabditis elegans (roundworm) | tag-151 | NP_494840.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_01087 | XP_003717850.1 |
Arabidopsis thaliana (thale cress) | AT1G42440 | NP_564480.1 |
Pan troglodytes (chimpanzee) | TSR1 | XP_003315339.1 |
TSR1 | XP_001086730.1 | |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009438 | XP_307850.4 |
Kluyveromyces lactis | KLLA0E05149g | XP_454177.1 |
Neurospora crassa | NCU01503 | XP_956952.1 |
Canis lupus familiaris (dog) | TSR1 | XP_548321.4 |
Gallus gallus (chicken) | LOC100857289 | XP_004946616.1 |
Drosophila melanogaster (fruit fly) | CG7338 | NP_649304.1 |
Bos taurus (cattle) | TSR1 | NP_001095403.1 |
Danio rerio (zebrafish) | tsr1 | NP_001032447.2 |
Eremothecium gossypii | AGOS_AER051C | NP_984911.1 |
Oryza sativa (rice) | Os11g0298400 | NP_001067728.1 |
Biological insights from 108 schizophrenia-associated genetic loci.
Nature511(7510)421-7(2014 Jul)
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
Analysis of two human pre-ribosomal factors, bystin and hTsr1, highlights differences in evolution of ribosome biogenesis between yeast and mammals.
Carron C, O'Donohue MF, Choesmel V, Faubladier M, Gleizes PE
Nucleic acids research39(1)280-91(2011 Jan)
Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data.
Vasan RS, Glazer NL, Felix JF, Lieb W, Wild PS, Felix SB, Watzinger N, Larson MG, Smith NL, Dehghan A, Grosshennig A, Schillert A, Teumer A, Schmidt R, Kathiresan S, Lumley T, Aulchenko YS, K?nig IR, Zeller T, Homuth G, Struchalin M, Aragam J, Bis JC, Rivadeneira F, Erdmann J, Schnabel RB, D?rr M, Zweiker R, Lind L, Rodeheffer RJ, Greiser KH, Levy D, Haritunians T, Deckers JW, Stritzke J, Lackner KJ, V?lker U, Ingelsson E, Kullo I, Haerting J, O'Donnell CJ, Heckbert SR, Stricker BH, Ziegler A, Reffelmann T, Redfield MM, Werdan K, Mitchell GF, Rice K, Arnett DK, Hofman A, Gottdiener JS, Uitterlinden AG, Meitinger T, Blettner M, Friedrich N, Wang TJ, Psaty BM, van Duijn CM, Wichmann HE, Munzel TF, Kroemer HK, Benjamin EJ, Rotter JI, Witteman JC, Schunkert H, Schmidt H, V?lzke H, Blankenberg S
JAMA302(2)168-78(2009 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
hTsr1 is involved downstream in nuclear export of the pre-40S particles.
Title: Analysis of two human pre-ribosomal factors, bystin and hTsr1, highlights differences in evolution of ribosome biogenesis between yeast and mammals.
Meta-analysis and genome-wide association study of gene-disease association. (HuGE Navigator)
Title: Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data.
The following TSR1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TSR1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu02946 | |
Clone ID Related Accession (Same CDS sequence) | NM_018128.4 , NM_018128.5 | |
Accession Version | NM_018128.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2415bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-03 | |
Organism | Homo sapiens(human) | |
Product | pre-rRNA-processing protein TSR1 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AB037822.1, BC019090.2 and AK026565.1. On Dec 12, 2003 this sequence version replaced NM_018128.3. ##Evidence-Data-START## Transcript exon combination :: BC110851.1, AB037822.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGCCC ACCGCCCCGG CCCGCTCAAG CAGCAGAATA AAGCTCATAA AGGCGGACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_060598.3 |
CDS | 958..3372 |
Translation |
Target ORF information:
Target ORF information:
|
NM_018128.4 |
1 | ATGGCGGCCC ACCGCCCCGG CCCGCTCAAG CAGCAGAATA AAGCTCATAA AGGCGGACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu02946 | |
Clone ID Related Accession (Same CDS sequence) | NM_018128.4 , NM_018128.5 | |
Accession Version | NM_018128.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2415bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-14 | |
Organism | Homo sapiens(human) | |
Product | pre-rRNA-processing protein TSR1 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL450226.1. On Aug 2, 2019 this sequence version replaced NM_018128.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1803613.276926.1, SRR1660807.186066.1 [ECO:0000332] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGCGGCCC ACCGCCCCGG CCCGCTCAAG CAGCAGAATA AAGCTCATAA AGGCGGACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_060598.3 |
CDS | 31..2445 |
Translation |
Target ORF information:
Target ORF information:
|
NM_018128.5 |
1 | ATGGCGGCCC ACCGCCCCGG CCCGCTCAAG CAGCAGAATA AAGCTCATAA AGGCGGACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Biological insights from 108 schizophrenia-associated genetic loci. |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
Analysis of two human pre-ribosomal factors, bystin and hTsr1, highlights differences in evolution of ribosome biogenesis between yeast and mammals. |
Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data. |