Gene Symbol | chia |
Entrez Gene ID | 548404 |
Full Name | chitinase, acidic |
Synonyms | chia1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » chia cDNA ORF clone
gRNAs
Gene Symbol | chia |
Entrez Gene ID | 548404 |
Full Name | chitinase, acidic |
Synonyms | chia1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
XM_012961552.2 | XP_012817006.1 | acidic mammalian chitinase isoform X1 |
NM_001199560.1 | NP_001186489.1 | acidic mammalian chitinase precursor |
Danio rerio (zebrafish) | zgc:65788 | NP_955897.2 |
Danio rerio (zebrafish) | chia.4 | NP_956740.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_01247 | XP_003714154.1 |
Bos taurus (cattle) | CHIA | NP_777124.1 |
Gallus gallus (chicken) | CHIA | NP_989760.1 |
Danio rerio (zebrafish) | chia.3 | NP_998378.1 |
Homo sapiens (human) | CHIA | NP_970615.2 |
Xenopus tropicalis (tropical clawed frog) | chia | NP_001186489.1 |
CHIA | XP_001104487.1 | |
Canis lupus familiaris (dog) | CHIA | XP_537030.3 |
Mus musculus (house mouse) | Chia1 | NP_075675.2 |
Rattus norvegicus (Norway rat) | Chia | NP_997469.1 |
Danio rerio (zebrafish) | zgc:173927 | NP_001103511.1 |
Neurospora crassa | NCU03209 | XP_965309.2 |
New paralogues and revised time line in the expansion of the vertebrate GH18 family.
Hussain M, Wilson JB
Journal of molecular evolution76(4)240-60(2013 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following chia gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the chia cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa23398 | |
Clone ID Related Accession (Same CDS sequence) | NM_001199560.1 | |
Accession Version | NM_001199560.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1449bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-21 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | acidic mammalian chitinase precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CF523087.1 and BC090382.1. On Dec 10, 2010 this sequence version replaced XM_002932975.1. ##Evidence-Data-START## Transcript exon combination :: BC090382.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028317, SAMD00028318 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCAAAAC TTATCCTCCT CGTTGGGTTG GCGCTAGTGT TAAATGCTCA GCTTGGCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001186489.1 |
CDS | 2..1450 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCAAAAC TTATCCTCCT CGTTGGGTTG GCGCTAGTGT TAAATGCTCA GCTTGGCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa27357 | |
Clone ID Related Accession (Same CDS sequence) | XM_012961552.2 | |
Accession Version | XM_012961552.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1269bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | acidic mammalian chitinase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012961552.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAATA ACCAGATCAC CACGATTGAA TGGAATGATG TCACTCTGTA CAGCTCCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012817006.1 |
CDS | 221..1489 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCCAATA ACCAGATCAC CACGATTGAA TGGAATGATG TCACTCTGTA CAGCTCCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
New paralogues and revised time line in the expansion of the vertebrate GH18 family. |