Gene Symbol
COL9A2
Entrez Gene ID
1298
Full Name
collagen type IX alpha 2 chain
Synonyms
DJ39G22.4,EDM2,MED,STL5
General protein information
Preferred Namescollagen type IX alpha 2 chain
Namescollagen alpha-2(IX) chain alpha 2 type IX collagen collagen IX, alpha-2 polypeptide collagen, type IX, alpha 2
Gene Type
protein-coding
Organism
Homo sapiens(human)
Genome
Chromosome: 1
Map Location: 1p34.2
Summary
This gene encodes one of the three alpha chains of type IX collagen, the major collagen component of hyaline cartilage. Type IX collagen, a heterotrimeric molecule, is usually found in tissues containing type II collagen, a fibrillar collagen. This chain is unusual in that, unlike the other two type IX alpha chains, it contains a covalently attached glycosaminoglycan side chain. Mutations in this gene are associated with multiple epiphyseal dysplasia. [provided by RefSeq, Jul 2008].
Disorder MIM:
120260
Disorder Html:
Epiphyseal dysplasia, multiple, 2, 600204 (3); ?Stickler syndrome, type V, 614284 (3)
mRNA and Protein(s)
mRNA
Protein
Name
NM_001852.3
NP_001843.1
collagen alpha-2(IX) chain precursor
XM_017000332.1
XP_016855821.1
collagen alpha-2(IX) chain isoform X1
XM_006710365.3
XP_006710428.1
collagen alpha-2(IX) chain isoform X2
XM_011540717.2
XP_011539019.1
collagen alpha-2(IX) chain isoform X5
NM_001852.4
NP_001843.1
collagen alpha-2(IX) chain precursor
XM_011540715.2
XP_011539017.1
collagen alpha-2(IX) chain isoform X3
XM_017000333.1
XP_016855822.1
collagen alpha-2(IX) chain isoform X4
XM_011540716.2
XP_011539018.1
collagen alpha-2(IX) chain isoform X3
Pan troglodytes (chimpanzee)
COL9A2
XP_003949434.1
Canis lupus familiaris (dog)
COL9A2
NP_001184099.1
Xenopus tropicalis (tropical clawed frog)
col9a2
NP_001090661.1
COL9A2
XP_001082953.2
Bos taurus (cattle)
COL9A2
XP_002686588.2
Mus musculus (house mouse)
Col9a2
NP_031767.2
Rattus norvegicus (Norway rat)
Col9a2
NP_001102145.1
Danio rerio (zebrafish)
col9a2
NP_997744.1
Gallus gallus (chicken)
COL9A2
NP_001258917.1
Homo sapiens (human)
COL9A2
NP_001843.1
Related articles in PubMed
Association between COL9A2 Gln326Arg mutations and the development of intervertebral disc disease in a Chinese population.
Meng T, Ren Q, Wang JM, Shi H, Zhang ST, Liu MT Genetics and molecular research : GMR15(4)(2016 Dec)
Meta-analysis of the association between COL9A2 genetic polymorphisms and lumbar disc disease susceptibility.
Zhang Z, Zhang J, Ding L, Teng X Spine39(20)1699-706(2014 Sep)
Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver.
Naba A, Clauser KR, Whittaker CA, Carr SA, Tanabe KK, Hynes RO BMC cancer14518(2014 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following COL9A2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL9A2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OHu56998
Clone ID Related Accession (Same CDS sequence)
XM_011540715.2
, XM_011540716.2
Accession Version
XM_011540715.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1800bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-05
Organism
Homo sapiens(human)
Product
collagen alpha-2(IX) chain isoform X3
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 6, 2016 this sequence version replaced XM_011540715.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Updated annotation
Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205
Annotation Version :: 109.20191205
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; propagated RefSeq model
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCTCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CGGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGGTG AGAGACGAGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_011539017.1
CDS 929..2728
Translation
Target ORF information:
RefSeq Version XM_011540715.2
Organism Homo sapiens(human)
Definition Homo sapiens collagen type IX alpha 2 chain (COL9A2), transcript variant X3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_011540715.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCTCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CGGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGGTG AGAGACGAGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu56998
Clone ID Related Accession (Same CDS sequence)
XM_011540715.2
, XM_011540716.2
Accession Version
XM_011540716.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1800bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-05
Organism
Homo sapiens(human)
Product
collagen alpha-2(IX) chain isoform X3
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 6, 2016 this sequence version replaced XM_011540716.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Updated annotation
Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205
Annotation Version :: 109.20191205
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; propagated RefSeq model
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCTCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CGGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGGTG AGAGACGAGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_011539018.1
CDS 409..2208
Translation
Target ORF information:
RefSeq Version XM_011540716.2
Organism Homo sapiens(human)
Definition Homo sapiens collagen type IX alpha 2 chain (COL9A2), transcript variant X4, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_011540716.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCTCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CGGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGGTG AGAGACGAGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu56999
Clone ID Related Accession (Same CDS sequence)
XM_011540717.2
Accession Version
XM_011540717.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1527bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-05
Organism
Homo sapiens(human)
Product
collagen alpha-2(IX) chain isoform X5
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 6, 2016 this sequence version replaced XM_011540717.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Updated annotation
Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205
Annotation Version :: 109.20191205
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; propagated RefSeq model
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGAAAGGTC CCCCAGGGCT GCAGGGAGTG AAGGGGCATG CGGGCAAACG CGGGATTCTG GGTGATCCTG GCCACCAGGG GAAGCCGGGT CCCAAGGGAG ATGTGGGTGC CTCTGGAGAG CAAGGCATCC CTGGACCACC GGGTCCCCAG GGCATCAGGG GCTACCCAGG CATGGCAGGG CCCAAGGGAG AGACGGGCCC TCATGGATAT AAAGGCATGG TGGGCGCTAT CGGTGCCACT GGGCCACCGG GTGAGGAAGG TCCTAGGGGA CCGCCAGGCC GAGCTGGGGA GAAGGGTGAC GAGGGCAGCC CAGGTATTCG TGGACCCCAG GGGATCACAG GCCCGAAAGG AGCAACGGGC CCCCCAGGCA TCAACGGCAA GGATGGGACC CCAGGCACGC CTGGCATGAA GGGCAGTGCA GGACAGGCGG GACAGCCCGG AAGTCCAGGC CACCAGGGCC TAGCGGGTGT GCCAGGCCAG CCTGGGACAA AAGGAGGCCC TGGAGACCAG GGTGAGCCGG GCCCGCAGGG CCTTCCTGGA TTCTCTGGTC CCCCTGGGAA AGAGGGAGAG CCAGGGCCTC GAGGAGAAAT TGGTCCCCAG GGCATCATGG GACAGAAGGG TGACCAAGGC GAGAGGGGTC CAGTGGGGCA ACCAGGCCCT CAGGGAAGGC AGGGCCCTAA GGGGGAGCAG GGCCCCCCCG GAATTCCAGG GCCCCAAGGC TTGCCAGGCG TCAAAGGAGA CAAGGGCTCC CCAGGGAAGA CCGGGCCCCG CGGCAAAGTG GGTGACCCAG GGGTGGCCGG CCTCCCCGGA GAGAAAGGCG AGAAGGGCGA GTCCGGCGAG CCGGGGCCCA AGGGACAGCA AGGAGTACGT GGAGAACCCG GCTACCCTGG CCCCAGCGGG GATGCGGGCG CCCCAGGGGT TCAGGGCTAC CCTGGTCCCC CCGGCCCTCG AGGACTGGCC GGGAACCGAG GCGTGCCAGG ACAGCCCGGG AGACAGGGCG TGGAGGGCCG GGATGCCACT GACCAGCACA TCGTGGATGT GGCGCTGAAG ATGCTGCAAG AGCAACTGGC AGAGGTCGCC GTGAGTGCCA AGCGGGAAGC CCTGGGTGCG GTGGGCATGA TGGGTCCTCC AGGACCTCCT GGGCCCCCTG GGTACCCAGG CAAGCAGGGC CCCCATGGGC ACCCTGGCCC TCGGGGCGTT CCTGGCATCG TGGGAGCCGT GGGTCAGATC GGCAACACGG GGCCCAAGGG AAAACGTGGA GAGAAGGGTG ATCCAGGAGA AGTGGGACGG GGGCACCCCG GGATGCCTGG GCCCCCAGGG ATCCCAGGAC TCCCTGGCCG GCCTGGCCAG GCAATCAACG GCAAGGATGG AGATCGAGGG TCCCCAGGGG CTCCAGGAGA GGCAGGTCGA CCTGGCCTGC CAGGCCCCGT GGGGCTGCCG GGCTTCTGTG AACCTGCCGC CTGCCTTGGA GCTTCGGCCT ATGCCTCTGC CCGCCTTACA GAGCCTGGAT CCATCAAGGG GCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_011539019.1
CDS 1530..3056
Translation
Target ORF information:
RefSeq Version XM_011540717.2
Organism Homo sapiens(human)
Definition Homo sapiens collagen type IX alpha 2 chain (COL9A2), transcript variant X6, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_011540717.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 ATGAAAGGTC CCCCAGGGCT GCAGGGAGTG AAGGGGCATG CGGGCAAACG CGGGATTCTG GGTGATCCTG GCCACCAGGG GAAGCCGGGT CCCAAGGGAG ATGTGGGTGC CTCTGGAGAG CAAGGCATCC CTGGACCACC GGGTCCCCAG GGCATCAGGG GCTACCCAGG CATGGCAGGG CCCAAGGGAG AGACGGGCCC TCATGGATAT AAAGGCATGG TGGGCGCTAT CGGTGCCACT GGGCCACCGG GTGAGGAAGG TCCTAGGGGA CCGCCAGGCC GAGCTGGGGA GAAGGGTGAC GAGGGCAGCC CAGGTATTCG TGGACCCCAG GGGATCACAG GCCCGAAAGG AGCAACGGGC CCCCCAGGCA TCAACGGCAA GGATGGGACC CCAGGCACGC CTGGCATGAA GGGCAGTGCA GGACAGGCGG GACAGCCCGG AAGTCCAGGC CACCAGGGCC TAGCGGGTGT GCCAGGCCAG CCTGGGACAA AAGGAGGCCC TGGAGACCAG GGTGAGCCGG GCCCGCAGGG CCTTCCTGGA TTCTCTGGTC CCCCTGGGAA AGAGGGAGAG CCAGGGCCTC GAGGAGAAAT TGGTCCCCAG GGCATCATGG GACAGAAGGG TGACCAAGGC GAGAGGGGTC CAGTGGGGCA ACCAGGCCCT CAGGGAAGGC AGGGCCCTAA GGGGGAGCAG GGCCCCCCCG GAATTCCAGG GCCCCAAGGC TTGCCAGGCG TCAAAGGAGA CAAGGGCTCC CCAGGGAAGA CCGGGCCCCG CGGCAAAGTG GGTGACCCAG GGGTGGCCGG CCTCCCCGGA GAGAAAGGCG AGAAGGGCGA GTCCGGCGAG CCGGGGCCCA AGGGACAGCA AGGAGTACGT GGAGAACCCG GCTACCCTGG CCCCAGCGGG GATGCGGGCG CCCCAGGGGT TCAGGGCTAC CCTGGTCCCC CCGGCCCTCG AGGACTGGCC GGGAACCGAG GCGTGCCAGG ACAGCCCGGG AGACAGGGCG TGGAGGGCCG GGATGCCACT GACCAGCACA TCGTGGATGT GGCGCTGAAG ATGCTGCAAG AGCAACTGGC AGAGGTCGCC GTGAGTGCCA AGCGGGAAGC CCTGGGTGCG GTGGGCATGA TGGGTCCTCC AGGACCTCCT GGGCCCCCTG GGTACCCAGG CAAGCAGGGC CCCCATGGGC ACCCTGGCCC TCGGGGCGTT CCTGGCATCG TGGGAGCCGT GGGTCAGATC GGCAACACGG GGCCCAAGGG AAAACGTGGA GAGAAGGGTG ATCCAGGAGA AGTGGGACGG GGGCACCCCG GGATGCCTGG GCCCCCAGGG ATCCCAGGAC TCCCTGGCCG GCCTGGCCAG GCAATCAACG GCAAGGATGG AGATCGAGGG TCCCCAGGGG CTCCAGGAGA GGCAGGTCGA CCTGGCCTGC CAGGCCCCGT GGGGCTGCCG GGCTTCTGTG AACCTGCCGC CTGCCTTGGA GCTTCGGCCT ATGCCTCTGC CCGCCTTACA GAGCCTGGAT CCATCAAGGG GCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu24811
Clone ID Related Accession (Same CDS sequence)
NM_001852.3
, XM_006710365.3
, NM_001852.4
Accession Version
NM_001852.3
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2070bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2017-12-26
Organism
Homo sapiens(human)
Product
collagen alpha-2(IX) chain precursor
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AF019406.1 and AL050341.18. This sequence is a reference standard in the RefSeqGene project. On May 27, 2003 this sequence version replaced NM_001852.2.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: M95610.1, BC136326.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1966682 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: full length.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCTC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCGGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001843.1
CDS 71..2140
Translation
Target ORF information:
RefSeq Version NM_001852.3
Organism Homo sapiens(human)
Definition Homo sapiens collagen type IX alpha 2 chain (COL9A2), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001852.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCTC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCGGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu24811
Clone ID Related Accession (Same CDS sequence)
NM_001852.3
, XM_006710365.3
, NM_001852.4
Accession Version
NM_001852.4 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2070bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-08-06
Organism
Homo sapiens(human)
Product
collagen alpha-2(IX) chain precursor
Comment
Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from CD722372.1, BC136326.1 and CB305733.1. This sequence is a reference standard in the RefSeqGene project. On Nov 28, 2018 this sequence version replaced NM_001852.3.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: M95610.1, BC136326.1 [ECO:0000332]
##Evidence-Data-END##
##RefSeq-Attributes-START##
MANE Ensembl match :: ENST00000372748.8/ ENSP00000361834.3
RefSeq Select criteria :: based on conservation, expression
##RefSeq-Attributes-END##
COMPLETENESS: full length.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCTC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCGGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001843.1
CDS 90..2159
Translation
Target ORF information:
RefSeq Version NM_001852.4
Organism Homo sapiens(human)
Definition Homo sapiens collagen type IX alpha 2 chain (COL9A2), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001852.4
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCTC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCGGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu24811
Clone ID Related Accession (Same CDS sequence)
NM_001852.3
, XM_006710365.3
, NM_001852.4
Accession Version
XM_006710365.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2070bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-05
Organism
Homo sapiens(human)
Product
collagen alpha-2(IX) chain isoform X2
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 6, 2016 this sequence version replaced XM_006710365.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Updated annotation
Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205
Annotation Version :: 109.20191205
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; propagated RefSeq model
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCTC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCGGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006710428.1
CDS 179..2248
Translation
Target ORF information:
RefSeq Version XM_006710365.3
Organism Homo sapiens(human)
Definition Homo sapiens collagen type IX alpha 2 chain (COL9A2), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006710365.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCTC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCGGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGATT CTGGGTGATC CTGGCCACCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC AGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGAGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA CGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACAGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CCGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAAA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GGTTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GCGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC CGTGGGGCTG CCGGGCTTCT GTGAACCTGC CGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu56997
Clone ID Related Accession (Same CDS sequence)
XM_017000332.1
Accession Version
XM_017000332.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 2082bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-05
Organism
Homo sapiens(human)
Product
collagen alpha-2(IX) chain isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Updated annotation
Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205
Annotation Version :: 109.20191205
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; propagated RefSeq model
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCTC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCGGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGG TGAGAGACGA GTGTCCAACC AACTGTCCAC CCGGAATGAA AGGTCCCCCA GGGCTGCAGG GAGTGAAGGG GCATGCGGGC AAACGCGGGA TTCTGGGTGA TCCTGGCCAC CAGGGGAAGC CGGGTCCCAA GGGAGATGTG GGTGCCTCTG GAGAGCAAGG CATCCCTGGA CCACCGGGTC CCCAGGGCAT CAGGGGCTAC CCAGGCATGG CAGGGCCCAA GGGAGAGACG GGCCCTCATG GATATAAAGG CATGGTGGGC GCTATCGGTG CCACTGGGCC ACCGGGTGAG GAAGGTCCTA GGGGACCGCC AGGCCGAGCT GGGGAGAAGG GTGACGAGGG CAGCCCAGGT ATTCGTGGAC CCCAGGGGAT CACAGGCCCG AAAGGAGCAA CGGGCCCCCC AGGCATCAAC GGCAAGGATG GGACCCCAGG CACGCCTGGC ATGAAGGGCA GTGCAGGACA GGCGGGACAG CCCGGAAGTC CAGGCCACCA GGGCCTAGCG GGTGTGCCAG GCCAGCCTGG GACAAAAGGA GGCCCTGGAG ACCAGGGTGA GCCGGGCCCG CAGGGCCTTC CTGGATTCTC TGGTCCCCCT GGGAAAGAGG GAGAGCCAGG GCCTCGAGGA GAAATTGGTC CCCAGGGCAT CATGGGACAG AAGGGTGACC AAGGCGAGAG GGGTCCAGTG GGGCAACCAG GCCCTCAGGG AAGGCAGGGC CCTAAGGGGG AGCAGGGCCC CCCCGGAATT CCAGGGCCCC AAGGCTTGCC AGGCGTCAAA GGAGACAAGG GCTCCCCAGG GAAGACCGGG CCCCGCGGCA AAGTGGGTGA CCCAGGGGTG GCCGGCCTCC CCGGAGAGAA AGGCGAGAAG GGCGAGTCCG GCGAGCCGGG GCCCAAGGGA CAGCAAGGAG TACGTGGAGA ACCCGGCTAC CCTGGCCCCA GCGGGGATGC GGGCGCCCCA GGGGTTCAGG GCTACCCTGG TCCCCCCGGC CCTCGAGGAC TGGCCGGGAA CCGAGGCGTG CCAGGACAGC CCGGGAGACA GGGCGTGGAG GGCCGGGATG CCACTGACCA GCACATCGTG GATGTGGCGC TGAAGATGCT GCAAGAGCAA CTGGCAGAGG TCGCCGTGAG TGCCAAGCGG GAAGCCCTGG GTGCGGTGGG CATGATGGGT CCTCCAGGAC CTCCTGGGCC CCCTGGGTAC CCAGGCAAGC AGGGCCCCCA TGGGCACCCT GGCCCTCGGG GCGTTCCTGG CATCGTGGGA GCCGTGGGTC AGATCGGCAA CACGGGGCCC AAGGGAAAAC GTGGAGAGAA GGGTGATCCA GGAGAAGTGG GACGGGGGCA CCCCGGGATG CCTGGGCCCC CAGGGATCCC AGGACTCCCT GGCCGGCCTG GCCAGGCAAT CAACGGCAAG GATGGAGATC GAGGGTCCCC AGGGGCTCCA GGAGAGGCAG GTCGACCTGG CCTGCCAGGC CCCGTGGGGC TGCCGGGCTT CTGTGAACCT GCCGCCTGCC TTGGAGCTTC GGCCTATGCC TCTGCCCGCC TTACAGAGCC TGGATCCATC AAGGGGCCTT GA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_016855821.1
CDS 113..2194
Translation
Target ORF information:
RefSeq Version XM_017000332.1
Organism Homo sapiens(human)
Definition Homo sapiens collagen type IX alpha 2 chain (COL9A2), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_017000332.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCTC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCGGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGG TGAGAGACGA GTGTCCAACC AACTGTCCAC CCGGAATGAA AGGTCCCCCA GGGCTGCAGG GAGTGAAGGG GCATGCGGGC AAACGCGGGA TTCTGGGTGA TCCTGGCCAC CAGGGGAAGC CGGGTCCCAA GGGAGATGTG GGTGCCTCTG GAGAGCAAGG CATCCCTGGA CCACCGGGTC CCCAGGGCAT CAGGGGCTAC CCAGGCATGG CAGGGCCCAA GGGAGAGACG GGCCCTCATG GATATAAAGG CATGGTGGGC GCTATCGGTG CCACTGGGCC ACCGGGTGAG GAAGGTCCTA GGGGACCGCC AGGCCGAGCT GGGGAGAAGG GTGACGAGGG CAGCCCAGGT ATTCGTGGAC CCCAGGGGAT CACAGGCCCG AAAGGAGCAA CGGGCCCCCC AGGCATCAAC GGCAAGGATG GGACCCCAGG CACGCCTGGC ATGAAGGGCA GTGCAGGACA GGCGGGACAG CCCGGAAGTC CAGGCCACCA GGGCCTAGCG GGTGTGCCAG GCCAGCCTGG GACAAAAGGA GGCCCTGGAG ACCAGGGTGA GCCGGGCCCG CAGGGCCTTC CTGGATTCTC TGGTCCCCCT GGGAAAGAGG GAGAGCCAGG GCCTCGAGGA GAAATTGGTC CCCAGGGCAT CATGGGACAG AAGGGTGACC AAGGCGAGAG GGGTCCAGTG GGGCAACCAG GCCCTCAGGG AAGGCAGGGC CCTAAGGGGG AGCAGGGCCC CCCCGGAATT CCAGGGCCCC AAGGCTTGCC AGGCGTCAAA GGAGACAAGG GCTCCCCAGG GAAGACCGGG CCCCGCGGCA AAGTGGGTGA CCCAGGGGTG GCCGGCCTCC CCGGAGAGAA AGGCGAGAAG GGCGAGTCCG GCGAGCCGGG GCCCAAGGGA CAGCAAGGAG TACGTGGAGA ACCCGGCTAC CCTGGCCCCA GCGGGGATGC GGGCGCCCCA GGGGTTCAGG GCTACCCTGG TCCCCCCGGC CCTCGAGGAC TGGCCGGGAA CCGAGGCGTG CCAGGACAGC CCGGGAGACA GGGCGTGGAG GGCCGGGATG CCACTGACCA GCACATCGTG GATGTGGCGC TGAAGATGCT GCAAGAGCAA CTGGCAGAGG TCGCCGTGAG TGCCAAGCGG GAAGCCCTGG GTGCGGTGGG CATGATGGGT CCTCCAGGAC CTCCTGGGCC CCCTGGGTAC CCAGGCAAGC AGGGCCCCCA TGGGCACCCT GGCCCTCGGG GCGTTCCTGG CATCGTGGGA GCCGTGGGTC AGATCGGCAA CACGGGGCCC AAGGGAAAAC GTGGAGAGAA GGGTGATCCA GGAGAAGTGG GACGGGGGCA CCCCGGGATG CCTGGGCCCC CAGGGATCCC AGGACTCCCT GGCCGGCCTG GCCAGGCAAT CAACGGCAAG GATGGAGATC GAGGGTCCCC AGGGGCTCCA GGAGAGGCAG GTCGACCTGG CCTGCCAGGC CCCGTGGGGC TGCCGGGCTT CTGTGAACCT GCCGCCTGCC TTGGAGCTTC GGCCTATGCC TCTGCCCGCC TTACAGAGCC TGGATCCATC AAGGGGCCTT GA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OHu83146
Clone ID Related Accession (Same CDS sequence)
XM_017000333.1
Accession Version
XM_017000333.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1788bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-05
Organism
Homo sapiens(human)
Product
collagen alpha-2(IX) chain isoform X4
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Updated annotation
Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205
Annotation Version :: 109.20191205
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; propagated RefSeq model
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCTCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CGGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGTGT CCAACCAACT GTCCACCCGG AATGAAAGGT CCCCCAGGGC TGCAGGGAGT GAAGGGGCAT GCGGGCAAAC GCGGGATTCT GGGTGATCCT GGCCACCAGG GGAAGCCGGG TCCCAAGGGA GATGTGGGTG CCTCTGGAGA GCAAGGCATC CCTGGACCAC CGGGTCCCCA GGGCATCAGG GGCTACCCAG GCATGGCAGG GCCCAAGGGA GAGACGGGCC CTCATGGATA TAAAGGCATG GTGGGCGCTA TCGGTGCCAC TGGGCCACCG GGTGAGGAAG GTCCTAGGGG ACCGCCAGGC CGAGCTGGGG AGAAGGGTGA CGAGGGCAGC CCAGGTATTC GTGGACCCCA GGGGATCACA GGCCCGAAAG GAGCAACGGG CCCCCCAGGC ATCAACGGCA AGGATGGGAC CCCAGGCACG CCTGGCATGA AGGGCAGTGC AGGACAGGCG GGACAGCCCG GAAGTCCAGG CCACCAGGGC CTAGCGGGTG TGCCAGGCCA GCCTGGGACA AAAGGAGGCC CTGGAGACCA GGGTGAGCCG GGCCCGCAGG GCCTTCCTGG ATTCTCTGGT CCCCCTGGGA AAGAGGGAGA GCCAGGGCCT CGAGGAGAAA TTGGTCCCCA GGGCATCATG GGACAGAAGG GTGACCAAGG CGAGAGGGGT CCAGTGGGGC AACCAGGCCC TCAGGGAAGG CAGGGCCCTA AGGGGGAGCA GGGCCCCCCC GGAATTCCAG GGCCCCAAGG CTTGCCAGGC GTCAAAGGAG ACAAGGGCTC CCCAGGGAAG ACCGGGCCCC GCGGCAAAGT GGGTGACCCA GGGGTGGCCG GCCTCCCCGG AGAGAAAGGC GAGAAGGGCG AGTCCGGCGA GCCGGGGCCC AAGGGACAGC AAGGAGTACG TGGAGAACCC GGCTACCCTG GCCCCAGCGG GGATGCGGGC GCCCCAGGGG TTCAGGGCTA CCCTGGTCCC CCCGGCCCTC GAGGACTGGC CGGGAACCGA GGCGTGCCAG GACAGCCCGG GAGACAGGGC GTGGAGGGCC GGGATGCCAC TGACCAGCAC ATCGTGGATG TGGCGCTGAA GATGCTGCAA GAGCAACTGG CAGAGGTCGC CGTGAGTGCC AAGCGGGAAG CCCTGGGTGC GGTGGGCATG ATGGGTCCTC CAGGACCTCC TGGGCCCCCT GGGTACCCAG GCAAGCAGGG CCCCCATGGG CACCCTGGCC CTCGGGGCGT TCCTGGCATC GTGGGAGCCG TGGGTCAGAT CGGCAACACG GGGCCCAAGG GAAAACGTGG AGAGAAGGGT GATCCAGGAG AAGTGGGACG GGGGCACCCC GGGATGCCTG GGCCCCCAGG GATCCCAGGA CTCCCTGGCC GGCCTGGCCA GGCAATCAAC GGCAAGGATG GAGATCGAGG GTCCCCAGGG GCTCCAGGAG AGGCAGGTCG ACCTGGCCTG CCAGGCCCCG TGGGGCTGCC GGGCTTCTGT GAACCTGCCG CCTGCCTTGG AGCTTCGGCC TATGCCTCTG CCCGCCTTAC AGAGCCTGGA TCCATCAAGG GGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_016855822.1
CDS 407..2194
Translation
Target ORF information:
RefSeq Version XM_017000333.1
Organism Homo sapiens(human)
Definition Homo sapiens collagen type IX alpha 2 chain (COL9A2), transcript variant X5, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_017000333.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCTCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CGGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGTGT CCAACCAACT GTCCACCCGG AATGAAAGGT CCCCCAGGGC TGCAGGGAGT GAAGGGGCAT GCGGGCAAAC GCGGGATTCT GGGTGATCCT GGCCACCAGG GGAAGCCGGG TCCCAAGGGA GATGTGGGTG CCTCTGGAGA GCAAGGCATC CCTGGACCAC CGGGTCCCCA GGGCATCAGG GGCTACCCAG GCATGGCAGG GCCCAAGGGA GAGACGGGCC CTCATGGATA TAAAGGCATG GTGGGCGCTA TCGGTGCCAC TGGGCCACCG GGTGAGGAAG GTCCTAGGGG ACCGCCAGGC CGAGCTGGGG AGAAGGGTGA CGAGGGCAGC CCAGGTATTC GTGGACCCCA GGGGATCACA GGCCCGAAAG GAGCAACGGG CCCCCCAGGC ATCAACGGCA AGGATGGGAC CCCAGGCACG CCTGGCATGA AGGGCAGTGC AGGACAGGCG GGACAGCCCG GAAGTCCAGG CCACCAGGGC CTAGCGGGTG TGCCAGGCCA GCCTGGGACA AAAGGAGGCC CTGGAGACCA GGGTGAGCCG GGCCCGCAGG GCCTTCCTGG ATTCTCTGGT CCCCCTGGGA AAGAGGGAGA GCCAGGGCCT CGAGGAGAAA TTGGTCCCCA GGGCATCATG GGACAGAAGG GTGACCAAGG CGAGAGGGGT CCAGTGGGGC AACCAGGCCC TCAGGGAAGG CAGGGCCCTA AGGGGGAGCA GGGCCCCCCC GGAATTCCAG GGCCCCAAGG CTTGCCAGGC GTCAAAGGAG ACAAGGGCTC CCCAGGGAAG ACCGGGCCCC GCGGCAAAGT GGGTGACCCA GGGGTGGCCG GCCTCCCCGG AGAGAAAGGC GAGAAGGGCG AGTCCGGCGA GCCGGGGCCC AAGGGACAGC AAGGAGTACG TGGAGAACCC GGCTACCCTG GCCCCAGCGG GGATGCGGGC GCCCCAGGGG TTCAGGGCTA CCCTGGTCCC CCCGGCCCTC GAGGACTGGC CGGGAACCGA GGCGTGCCAG GACAGCCCGG GAGACAGGGC GTGGAGGGCC GGGATGCCAC TGACCAGCAC ATCGTGGATG TGGCGCTGAA GATGCTGCAA GAGCAACTGG CAGAGGTCGC CGTGAGTGCC AAGCGGGAAG CCCTGGGTGC GGTGGGCATG ATGGGTCCTC CAGGACCTCC TGGGCCCCCT GGGTACCCAG GCAAGCAGGG CCCCCATGGG CACCCTGGCC CTCGGGGCGT TCCTGGCATC GTGGGAGCCG TGGGTCAGAT CGGCAACACG GGGCCCAAGG GAAAACGTGG AGAGAAGGGT GATCCAGGAG AAGTGGGACG GGGGCACCCC GGGATGCCTG GGCCCCCAGG GATCCCAGGA CTCCCTGGCC GGCCTGGCCA GGCAATCAAC GGCAAGGATG GAGATCGAGG GTCCCCAGGG GCTCCAGGAG AGGCAGGTCG ACCTGGCCTG CCAGGCCCCG TGGGGCTGCC GGGCTTCTGT GAACCTGCCG CCTGCCTTGG AGCTTCGGCC TATGCCTCTG CCCGCCTTAC AGAGCCTGGA TCCATCAAGG GGCCTTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.